d349fb4 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>2023-10-24 11:42:45 -0400;
6338c66 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>2023-10-24 11:42:45 -0400;
99ef8f4 Bump version by
fursham_h <fursham.h@gmail.com>2023-08-02 17:38:24 +0100;
9acc377 Updated dep by
fursham_h <fursham.h@gmail.com>2023-08-02 17:28:11 +0100;
a04e2de Improved matching func by
fursham_h <fursham.h@gmail.com>2023-08-02 17:06:23 +0100;
13f3601 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by
J Wokaty <jwokaty@users.noreply.github.com>2023-04-25 11:38:52 -0400;
399210e (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by
J Wokaty <jwokaty@users.noreply.github.com>2023-04-25 11:38:52 -0400;
5eaed26 Added new variable to `predictNMD()` output by
Fursham <fursham.h@gmail.com>2023-01-03 14:29:19 +0000;
96b2315 Update BioC URL by
Fursham <fursham.h@gmail.com>2023-01-03 14:28:21 +0000;
a533565 Add missing namespacee by
Fursham <fursham.h@gmail.com>2023-01-03 13:20:02 +0000;
8aac479 Update test output by
Fursham <fursham.h@gmail.com>2023-01-03 13:01:39 +0000;
6c2734a Update test output by
Fursham <fursham.h@gmail.com>2023-01-03 12:59:16 +0000;
4000b31 Add stop_coord to NMD transcripts by
Fursham <fursham.h@gmail.com>2023-01-03 10:51:55 +0000;
3ad4d70 Get stop_coord as string by
Fursham <fursham.h@gmail.com>2023-01-03 10:51:34 +0000;
f17d12e Corrected stop coord retrieval by
Fursham <fursham.h@gmail.com>2023-01-03 10:51:23 +0000;
1c7b9bc Compute stop coord by
Fursham <fursham.h@gmail.com>2023-01-03 10:34:43 +0000;
60c025b Add new output variable by
Fursham <fursham.h@gmail.com>2023-01-03 10:21:21 +0000;
d8724d2 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>2022-11-01 11:27:13 -0400;
aec2060 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>2022-11-01 11:27:13 -0400;
fd5cc25 Bump version by
Fursham Hamid <fursham.h@gmail.com>2022-09-02 12:42:26 +0100;
449c46d Add param to documentation by
Fursham Hamid <fursham.h@gmail.com>2022-09-02 12:41:58 +0100;
9adde4e Bump version by
Fursham Hamid <fursham.h@gmail.com>2022-08-31 13:57:55 +0100;
45b1647 Moved {crayon} to imports by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 18:14:59 +0100;
f1201e4 Merge branch 'stage' by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 14:47:44 +0100;
76b5cf7 Removed cat print by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 14:21:19 +0100;
1dbadb9 Bump version by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 13:57:35 +0100;
605b4a5 Update messages by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 13:57:19 +0100;
1a3e783 Added new dependency {crayon} by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 13:57:02 +0100;
905c091 Update manuals by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 12:21:18 +0100;
b391504 Update Roxygen ver by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 12:21:01 +0100;
eed91e6 Allow setting no. of workers for predictDomains by
Fursham Hamid <fursham.h@gmail.com>2022-08-24 12:06:42 +0100;
9d824fc Correct hyperlink to bioc by
Fursham Hamid <fursham.h@gmail.com>2022-07-05 18:42:56 +0100;
273374e Add citation for Bioc by
Fursham Hamid <fursham.h@gmail.com>2022-07-05 11:05:30 +0100;
84be38f Corrected Version by
Fursham Hamid <fursham.h@gmail.com>2022-07-04 13:44:36 +0100;
3f91ea1 Fixed vignette for build by
Fursham Hamid <fursham.h@gmail.com>2022-07-04 13:43:44 +0100;
5d1ef37 factR v1 release by
Fursham Hamid <fursham.h@gmail.com>2022-07-04 13:39:20 +0100;
7d903e9 Switched off AHub dl for BioCheck by
Fursham Hamid <fursham.h@gmail.com>2022-06-29 16:48:38 +0100;
53eead6 Changes to correct Roxygen doc by
Fursham Hamid <fursham.h@gmail.com>2022-06-06 10:26:18 +0100;
01bb440 Remove unnecessary vignette by
Fursham Hamid <fursham.h@gmail.com>2022-06-06 10:07:01 +0100;
bab102d Remove message suppresses by
Fursham Hamid <fursham.h@gmail.com>2022-06-06 09:33:39 +0100;
c05232c Remove message suppresses by
Fursham Hamid <fursham.h@gmail.com>2022-06-06 09:30:24 +0100;
e285df8 Merge branch 'master' of github.com:fursham-h/factR by
Fursham Hamid <fursham.h@gmail.com>2022-06-06 09:15:33 +0100;
b7f5c73 Correct internal link by
Fursham <fursham.h@gmail.com>2022-06-03 11:09:13 +0100;
b878b63 Update installation instructions by
Fursham <fursham.h@gmail.com>2022-06-03 11:09:06 +0100;
1638b53 Change knit format by
Fursham <fursham.h@gmail.com>2022-06-03 11:08:53 +0100;
44fa7bf Update code to handle pending request by
Fursham <fursham.h@gmail.com>2022-06-03 11:08:36 +0100;
54736e3 Added scripts to generated extdata by
Fursham <fursham.h@gmail.com>2022-06-03 09:57:34 +0100;
34e727f Bump version by
Fursham <fursham.h@gmail.com>2022-06-03 09:40:38 +0100;
8193aa7 Remove dev News by
Fursham <fursham.h@gmail.com>2022-06-03 09:40:30 +0100;
4c29c1e Added predictdomain testing by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 16:07:41 +0100;
7442181 Added test for importing by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 16:04:04 +0100;
ba1115c Added codecov by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 15:47:06 +0100;
37b6743 Correct fas icon by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 15:18:16 +0100;
e93f79f Correct vignette title by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 12:13:20 +0100;
c3dcf14 Improve getting started description by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 11:55:51 +0100;
b93cd4b Correct fa icon by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 11:54:20 +0100;
d0c0b1d Remove evaluation of example by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 10:56:52 +0100;
5cb435d Added ref to quickstart by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 10:55:45 +0100;
8e7fcf6 Add quickstart doc by
Fursham Hamid <fursham.h@gmail.com>2022-05-13 10:55:12 +0100;
9553d46 Add custom gh-pages by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 14:48:34 +0100;
b53ee54 Version bump by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 12:28:02 +0100;
c2e4734 Remove evaluation of export by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 12:22:34 +0100;
5adca56 Bump version by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 11:48:26 +0100;
1f00b26 Simplify documentation by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 10:05:41 +0100;
2dff30f Update version for submission by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:36:29 +0100;
153e613 Streamlined ReadMe by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:33:17 +0100;
4a24d2f Shorten lines by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:28:31 +0100;
2d4b920 Update examples by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:28:23 +0100;
b63d869 Set LazyData to FALSE by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:20:12 +0100;
34e130a BiocCheck changes by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:16:23 +0100;
c35cae1 Update sc_merged_sample.gtf.gz by
Fursham Hamid <fursham.h@gmail.com>2022-05-06 09:07:59 +0100;
9622cda Modified workflow by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 16:21:05 +0100;
487238e Updated GTF file by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 16:20:49 +0100;
4d0e854 Updated description of sc dataset by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 15:59:25 +0100;
e5a3e10 Created a compact GTF file by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 15:54:44 +0100;
aa9870f Simplify ReadMe title by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 15:51:20 +0100;
78a8231 Remove new dependencies by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 10:13:11 +0100;
a1ab05a Update vignette for RMDcheck by
Fursham Hamid <fursham.h@gmail.com>2022-05-05 10:13:04 +0100;
7ff3714 Update ReadMe by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 18:17:16 +0100;
30d8509 Update README.md by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:48:31 +0100;
075d323 Update README.md by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:48:05 +0100;
f58119d Update README.md by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:47:17 +0100;
4d0ddad Updated docs by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:44:40 +0100;
baa7bbb Remove dev functions by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:38:34 +0100;
051bf07 Update query_gtf dataset by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:38:20 +0100;
3276abb Remove dev functions by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:28:03 +0100;
10bec6c Update NAMESPACE by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:16:26 +0100;
cb8985f Remove dev documents by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:16:20 +0100;
95d6eac Remove new tests by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:11:30 +0100;
d64f02b Remove old scripts by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:08:00 +0100;
b605ae9 Remove exports by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:07:49 +0100;
2fb2545 Update publication year by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:05:26 +0100;
0c88284 Remove dev features by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:05:11 +0100;
dd95bfa Add version by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:05:00 +0100;
2715a25 Restructure news by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:04:43 +0100;
4f638ec Remove new suggests by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:04:35 +0100;
5344621 Bump version by
Fursham Hamid <fursham.h@gmail.com>2022-05-04 15:04:22 +0100;
57e12b5 Update documentation by
Fursham Hamid <fursham.h@gmail.com>2022-04-13 10:22:42 +0100;
b6bc17a Changed consistency of default args by
Fursham Hamid <fursham.h@gmail.com>2022-04-13 10:15:58 +0100;
5c34057 Fixed error with cond statement by
Fursham Hamid <fursham.h@gmail.com>2022-04-13 10:15:05 +0100;
