# Generated by roxygen2: do not edit by hand

export(compMatrix)
export(diffHet)
export(epiBox)
export(epiMA)
export(epiMap)
export(epiPCA)
export(epiTSNE)
export(epiNetwork)
export(epiPathway)
export(jaccard)
export(makeGR)
export(moduleAnno)
export(moduleSim)
export(moduleVisual)
export(readGR)
export(splitn)
export(summarize)
export(userobj)
export(shannon)
import(ggplot2)
importFrom(GenomicRanges,GRanges)
importFrom(GenomicRanges,findOverlaps)
importFrom(GenomicRanges,seqnames)
importFrom(GenomicRanges,values)
importFrom(IRanges,IRanges)
importFrom(ReactomePA,enrichPathway)
importFrom(Rtsne,Rtsne)
importFrom(S4Vectors,Rle)
importFrom(S4Vectors,queryHits)
importFrom(WGCNA,blockwiseModules)
importFrom(WGCNA,exportNetworkToCytoscape)
importFrom(WGCNA,labeledHeatmap)
importFrom(WGCNA,moduleEigengenes)
importFrom(WGCNA,pickSoftThreshold)
importFrom(data.table,":=")
importFrom(doParallel,registerDoParallel)
importFrom(foreach,"%dopar%")
importFrom(foreach,"%do%")
importFrom(foreach,foreach)
importFrom(S4Vectors,subjectHits)
importFrom(GenomicRanges,mcols)
importFrom(utils,tail)
importFrom(qvalue,qvalue)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,rgb)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,par)
importFrom(graphics,barplot)
importFrom(igraph,layout_on_sphere)
importFrom(pheatmap,pheatmap)
importFrom(EntropyExplorer,EntropyExplorer)
importFrom(stats,complete.cases)
importFrom(WGCNA,cor)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,t.test)
importFrom(stats,phyper)