% Generated by roxygen2: do not edit by hand % Please edit documentation in R/data.R \docType{data} \name{background} \alias{background} \alias{datTraits} \alias{DEG} \alias{DEH} \alias{diffhetmatrix} \alias{moduledm} \alias{modulesil} \alias{promoter} \alias{sharedmatrix} \alias{myValues} \title{example data background} \format{background: A data frame with 31995 rows and 1 variables: \describe{ \item{gene}{background gene list} }} \usage{ data(background) background data(datTraits) datTraits data(DEG) DEG data(DEH) DEH data(diffhetmatrix) diffhetmatrix data(moduledm) moduledm data(modulesil) modulesil data(promoter) promoter data(sharedmatrix) sharedmatrix data(myValues) myValues } \value{ A data frame A large GRanges object } \description{ background: A data frame containing 31995 elements as background used for pathway enrichment analysis datTraits: Clinical traits containing OS,EFS,age DEG: Differentially expressed genes compared CEBPA-sil vs.normal DEH: DEH loci diffhetmatrix: A differentially heterogeneity matrix moduledm: Module information for CEBPA-dm mutation samples modulesil: Module information for CEBPA-sil mutation samples promoter: The promoter region annotation file sharedmatrix: Epigenetic heterogeneity values for 6 patients on DEH loci myValues: customized epigenetic diversity metric for 4 samples } \keyword{datasets}