1. edge
  2. NAMESPACE
Browse code

remove jackstraw dependence

Andrew Bass authored on 10/09/2022 22:18:17
Showing 1 changed files
NAMESPACE
History View file @ 1ef3775
... ... 
@@ -6,7 +6,6 @@ export("individual<-")
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 export("nullMatrix<-")
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 export("nullModel<-")
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 export("qvalueObj<-")
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-export(apply_jackstraw)
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 export(apply_qvalue)
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 export(apply_snm)
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 export(apply_sva)
... ... 
@@ -35,7 +34,6 @@ exportMethods(nullModel)
35 34 
 exportMethods(sType)
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 import(Biobase)
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 import(MASS)
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-import(jackstraw)
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 import(methods)
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 import(qvalue)
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 import(snm)
Browse code

fixed error message (jackstraw was updated)

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/edge@112239 bc3139a8-67e5-0310-9ffc-ced21a209358

Andrew Bass authored on 06/01/2016 18:41:38
Showing 1 changed files
NAMESPACE
History View file @ 127d056
... ... 
@@ -1,4 +1,4 @@
1 
-# Generated by roxygen2 (4.1.1): do not edit by hand
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+# Generated by roxygen2: do not edit by hand
2 2
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 export("fullMatrix<-")
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 export("fullModel<-")
... ... 
@@ -35,11 +35,11 @@ exportMethods(nullModel)
35 35 
 exportMethods(sType)
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 import(Biobase)
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 import(MASS)
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+import(jackstraw)
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 import(methods)
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 import(qvalue)
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 import(snm)
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 import(splines)
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 import(sva)
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-import(jackstraw)
44 44 
 useDynLib(edge,kldistance)
45 45 
 useDynLib(edge,odpScoreCluster)
Browse code

Update to edge 2.1.1.

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/edge@109554 bc3139a8-67e5-0310-9ffc-ced21a209358

John D Storey authored on 13/10/2015 01:16:14
Showing 1 changed files
NAMESPACE
History View file @ cbcd0be
... ... 
@@ -1,4 +1,4 @@
1 
-# Generated by roxygen2 (4.1.0): do not edit by hand
1 
+# Generated by roxygen2 (4.1.1): do not edit by hand
2 2
3 3 
 export("fullMatrix<-")
4 4 
 export("fullModel<-")
... ... 
@@ -6,6 +6,7 @@ export("individual<-")
6 6 
 export("nullMatrix<-")
7 7 
 export("nullModel<-")
8 8 
 export("qvalueObj<-")
9 
+export(apply_jackstraw)
9 10 
 export(apply_qvalue)
10 11 
 export(apply_snm)
11 12 
 export(apply_sva)
... ... 
@@ -39,5 +40,6 @@ import(qvalue)
39 40 
 import(snm)
40 41 
 import(splines)
41 42 
 import(sva)
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+import(jackstraw)
42 44 
 useDynLib(edge,kldistance)
43 45 
 useDynLib(edge,odpScoreCluster)
Browse code

add packages to the repository

edge/ pwOmics/ EMDomics/



git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/edge@102444 bc3139a8-67e5-0310-9ffc-ced21a209358

Sonali Arora authored on 14/04/2015 17:06:48
Showing 1 changed files
NAMESPACE
History View file @ 9001e37
1 1 
new file mode 100644
... ... 
@@ -0,0 +1,43 @@
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+# Generated by roxygen2 (4.1.0): do not edit by hand
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+
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+export("fullMatrix<-")
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+export("fullModel<-")
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+export("individual<-")
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+export("nullMatrix<-")
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+export("nullModel<-")
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+export("qvalueObj<-")
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+export(apply_qvalue)
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+export(apply_snm)
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+export(apply_sva)
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+export(betaCoef)
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+export(build_models)
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+export(build_study)
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+export(deSet)
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+export(fitFull)
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+export(fitNull)
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+export(fullMatrix)
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+export(fullModel)
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+export(individual)
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+export(lrt)
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+export(nullMatrix)
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+export(odp)
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+export(qvalueObj)
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+export(resFull)
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+export(resNull)
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+export(show)
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+export(summary)
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+exportClasses(deFit)
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+exportClasses(deSet)
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+exportMethods(fit_models)
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+exportMethods(kl_clust)
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+exportMethods(nullModel)
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+exportMethods(sType)
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+import(Biobase)
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+import(MASS)
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+import(methods)
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+import(qvalue)
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+import(snm)
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+import(splines)
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+import(sva)
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+useDynLib(edge,kldistance)
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+useDynLib(edge,odpScoreCluster)