% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/AllGenerics.R, R/deFit-methods.R, R/deSet-methods.R
\docType{methods}
\name{summary}
\alias{summary}
\alias{summary,deFit-method}
\alias{summary,deSet-method}
\title{Summary of deFit and deSet}
\usage{
summary(object, ...)

\S4method{summary}{deFit}(object)

\S4method{summary}{deSet}(object, ...)
}
\arguments{
\item{object}{\code{S4 object}: \code{\linkS4class{deSet}}}

\item{\dots}{additional parameters}
}
\value{
Summary of \code{\linkS4class{deSet}} object
}
\description{
Summary of \code{\linkS4class{deFit}} and \code{\linkS4class{deSet}} objects.
}
\examples{
# import data
library(splines)
data(kidney)
age <- kidney$age
sex <- kidney$sex
kidexpr <- kidney$kidexpr
cov <- data.frame(sex = sex, age = age)

# create models
null_model <- ~sex
full_model <- ~sex + ns(age, df = 4)

# create deSet object from data
de_obj <- build_models(data = kidexpr, cov = cov, null.model = null_model,
full.model = full_model)

# get summary
summary(de_obj)

# run odp and summarize
de_odp <- odp(de_obj, bs.its= 20)
summary(de_odp)
}
\author{
John Storey, Andrew Bass
}
\keyword{summary}