Package: crlmm Type: Package Title: Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays. Version: 1.7.11 Date: 2010-07-30 Author: Benilton S Carvalho , Robert Scharpf , Matt Ritchie , Ingo Ruczinski , Rafael A Irizarry Maintainer: Benilton S Carvalho , Robert Scharpf , Matt Ritchie Description: Faster implementation of CRLMM specific to SNP 5.0 and 6.0 arrays, as well as a copy number tool specific to 5.0, 6.0, and Illumina platforms License: Artistic-2.0 Depends: R (>= 2.11.0), methods, Biobase (>= 2.7.2), oligoClasses (>= 1.11.0) Imports: affyio (>= 1.15.2), ellipse, ff, genefilter, mvtnorm, preprocessCore, splines, stats, SNPchip, utils Suggests: hapmapsnp6, genomewidesnp6Crlmm (>= 1.0.2), snpMatrix, ellipse Collate: AllGenerics.R AllClasses.R methods-CNSet.R methods-eSet.R methods-LinearModelParameter.R methods-SnpSuperSet.R cnrma-functions.R crlmm-functions.R crlmm-illumina.R snprma-functions.R plot-methods.R utils.R zzz.R LazyLoad: yes biocViews: Microarray, Preprocessing, SNP, Bioinformatics, CopyNumberVariants