 |
Viewfda1107
methods Ns, medians, corr, and mads return arrays.
Rob Scharp authored on 21/08/2010 02:50:19
|
|
View6b75ec7
Added citation to crlmmCopynumber. Deleted many of the commented functions in cnrma-functions.R
Rob Scharp authored on 21/08/2010 02:50:15
|
|
Viewdf2226f
Changed totalCopyNumber to totalCopynumber to be consistent with caps in crlmmCopynumber. Fixed a few bugs in the .Rd files
Rob Scharp authored on 21/08/2010 02:50:10
|
|
View66900fe
Edits to CA,CB, ACN accessors for copy number
Rob Scharp authored on 21/08/2010 02:50:05
|
|
Viewada0da1
commented replacement method for snpCallProbability.
Rob Scharp authored on 21/08/2010 02:50:00
|
|
View6846d58
Numerous changed to copy number estimation detailed below.
Rob Scharp authored on 21/08/2010 02:49:54
|
|
Viewd08acba
A number of changes to fit.lm1 and crlmmCopynumber. The number of genotypes is now stored as part of the CNSet class object.
Rob Scharp authored on 21/08/2010 02:49:47
|
|
View33a5ea6
Added methods for flags and flags<-. Added 'flags' as an element to the LinearModelParameter object
Rob Scharp authored on 21/08/2010 02:49:41
|
|
Viewc45787d
Renamed computeCN crlmmCopynumber
Rob Scharp authored on 21/08/2010 02:49:37
|
|
View8800496
Removed args normal and snpflags from fit.lm* functions. Removed code that initializes the flag and snpflag matrices in computeCN
Rob Scharp authored on 21/08/2010 02:49:34
|
|
Viewe84db07
Commented the 2 lines in fit.lm4 indicated below
Rob Scharp authored on 21/08/2010 02:49:31
|
|
Viewe63564b
begin commening the 'normal' matrix as this is not used.
Rob Scharp authored on 21/08/2010 02:49:25
|
|
View14bb412
Fixed cross-references that were not linked to a topic in CNSet-methods and copynumberAccessors Rd files
Rob Scharp authored on 21/08/2010 02:49:20
|
|
View69ec864
Added help files for copy number accessors. Fixed bugs in CA, CB, and total copy number methods.
Rob Scharp authored on 21/08/2010 02:49:14
|
|
View8160162
Updated sample.CNSetLM helpfile with coercion to v1.0.1 of the CNSet class definition
Rob Scharp authored on 21/08/2010 02:49:06
|
