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View f3d4014
genotype function should be independent of annotation package versionRob Scharp authored on 11/11/2010 04:13:23 |
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View 4191b5f
Bug fix for estimation of copy number at nonpolymorphic loci on chromosome X.Rob Scharp authored on 11/11/2010 04:13:08 |
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View 3f40458
getFeatureData only returns features with chromosome annotationRob Scharp authored on 11/11/2010 04:13:03 |
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View 94bdc2e
import ffdf class from oligoClassesRob Scharp authored on 20/10/2010 13:43:26 |
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View 73fd737
Update summarizeNps function for illumina platformRob Scharp authored on 20/10/2010 13:43:06 |
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View 6a6b67c
Remove help file for ffdf-class. Adding documentation for CNSet accessors.Rob Scharp authored on 04/10/2010 02:21:59 |
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View 7799caf
importing ff_matrix class from oligoClassesRob Scharp authored on 30/08/2010 19:41:12 |
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View 12e6763
more pruning of NAMESPACERob Scharp authored on 30/08/2010 19:41:10 |
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View c6d091f
cleaned some of the temporary exports in the namespaceRob Scharp authored on 30/08/2010 19:41:08 |
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View 56b783e
Revised accesors in methods-AssayData -- some of the conflicts resolved by hand during rebase were incorrectRob Scharp authored on 30/08/2010 19:41:03 |
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View d5b39e2
CB estimates were NA for SNP indices were mixed with NP indices. Bug was fixed in the ACN functionRob Scharp authored on 30/08/2010 19:40:54 |
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View 0198a9a
Fixed several bugs in the CA, CB, ACN functions. Updated the copynumber vignetteRob Scharp authored on 30/08/2010 19:40:42 |
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View 3e4db4b
constructIlluminaAssayData allows for either ff or matrices. Fixed bug in accessors for medians, mads, ...Rob Scharp authored on 30/08/2010 19:40:33 |
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View 52e58a4
Export plotCNSetLM for debugging.Rob Scharp authored on 30/08/2010 19:40:28 |
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View 630adba
Exporting list and ffdf classes so that lM<- assignment worksRob Scharp authored on 30/08/2010 19:40:16 |