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Viewd08acba
A number of changes to fit.lm1 and crlmmCopynumber. The number of genotypes is now stored as part of the CNSet class object.
Rob Scharp authored on 21/08/2010 02:49:47
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View33a5ea6
Added methods for flags and flags<-. Added 'flags' as an element to the LinearModelParameter object
Rob Scharp authored on 21/08/2010 02:49:41
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View69ec864
Added help files for copy number accessors. Fixed bugs in CA, CB, and total copy number methods.
Rob Scharp authored on 21/08/2010 02:49:14
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View8160162
Updated sample.CNSetLM helpfile with coercion to v1.0.1 of the CNSet class definition
Rob Scharp authored on 21/08/2010 02:49:06
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View97e84a8
Added methods for LinearModelParameter class. removed methods for SnpSuperSet class.
Rob Scharp authored on 21/08/2010 02:48:57
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View3c6c270
Added Ingo to the crlmm authorship. Moved Rafa to the last position.
Rob Scharp authored on 21/08/2010 02:48:43
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View805ca33
added ACN method in methods-CNSet.R. CA and CB call ACN.
Rob Scharp authored on 21/08/2010 02:48:26
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View481f470
added generics for CA, CB, and totalCopyNumber (moved from oligoClasses)
Rob Scharp authored on 21/08/2010 02:48:14
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View752632c
added totalCopyNumber method to methods-CNSet (removed from oligoClasses)
Rob Scharp authored on 21/08/2010 02:48:11
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View63fb6e4
Added CA, CB methods to methods-CNSet.R
Rob Scharp authored on 21/08/2010 02:48:08
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View5a23c45
Commented out computation of standard errors for coefficients. Replaced crossprod(solve...) with call to the Fortran library dqrls
Rob Scharp authored on 21/08/2010 02:47:35
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Viewdded663
commented sums of squared residuals calculation in nuphiAllele2.
Rob Scharp authored on 21/08/2010 02:47:30
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Viewb5b74b9
Added weighted.lm argument to fit.lm1, fit.lm2 and computeCN. Added computeCN.
Rob Scharp authored on 21/08/2010 02:47:27
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View76f72a5
Fixed bug in fit.lm functions -- the correlations were assigned incorrectly.
Rob Scharp authored on 21/08/2010 02:47:23
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View518a290
Added accessors for linear model parameters.
Rob Scharp authored on 21/08/2010 02:47:15
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