February 16, 2011
View 3acddff

Remove code used for testing MIN.SAMPLES

Rob Scharp authored on 16/02/2011 15:59:02
View 9e769c7

Add temporary code for checking MIN.SAMPLE in copynumber vignette

Rob Scharp authored on 16/02/2011 15:58:50
View 8b529b4

commented another cat statement inside readIdatFiles

Rob Scharp authored on 16/02/2011 15:58:47
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Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 16/02/2011 15:58:28
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Bug in copy number accessors fixed.

Rob Scharp authored on 16/02/2011 15:58:23
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Fix bug in CB accessor for nonpolymorphic markers

Rob Scharp authored on 16/02/2011 15:58:19
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fix for finding index of nonpolymorphic markers in genotype function

Rob Scharp authored on 16/02/2011 15:58:14
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Fix writing of genotypes and confidence scores using ffcolapply

Rob Scharp authored on 16/02/2011 15:58:10
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update processCEL2 -- only read intensities for NP probes that are included in the npProbesFid object

Rob Scharp authored on 16/02/2011 15:58:06
View 2e87b99

Update illumina_copynumber vignette

Rob Scharp authored on 16/02/2011 15:57:58
View 1813938

changes to shrinkGenotypeSummarries and C3 function for estimation of copy number at SNPs on chromosome X

Rob Scharp authored on 16/02/2011 15:57:05
View 19d18ec

Bug in copy number accessors fixed.

Rob Scharp authored on 16/02/2011 15:56:57
View 0380310

Fix bug in CB accessor for nonpolymorphic markers

Rob Scharp authored on 16/02/2011 15:56:52
View 7eaf43e

fix for finding index of nonpolymorphic markers in genotype function

Rob Scharp authored on 16/02/2011 15:56:48
View 78cb8e7

Fix writing of genotypes and confidence scores using ffcolapply

Rob Scharp authored on 16/02/2011 15:56:43