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Viewc87212d
Added method totalCopyNumber to compute the total copy number for CNSet class, regardless of whether assay data elements are ff objects.Rob Scharp authored on 27/07/2010 03:01:30 |
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Viewd41653d
fixed bug in copyNumber method for CNSet objectsRob Scharp authored on 27/05/2010 14:13:18 |
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Viewc2b6e3a
the inst/scripts/copynumber.pdf and inst/scripts/illumina_copynumber.pdf are updated. An example CNSetLM object is providedRob Scharp authored on 27/05/2010 13:41:50 |
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Viewea66649
added a few Rd files. Removed metaArray from NAMESPACERob Scharp authored on 11/04/2010 16:10:26 |
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Viewd5bc779
added genotype2 and crlmmCopynumber2Rob Scharp authored on 02/04/2010 03:03:19 |
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Viewc00f715
updates to genotype, crlmmIlluminaRS, and crlmmCopynumberRob Scharp authored on 25/03/2010 13:01:51 |
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Viewfd65333
update initializeBigMatrix. methods for CNSetLMRob Scharp authored on 18/03/2010 13:47:33 |
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View1c2a3f4
fixed bugs in genotype and crlmmIlluminaRS. changed arguments to crlmmCopynumber. removed cnOptions functionRob Scharp authored on 18/03/2010 12:19:14 |
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Viewe40ceb4
fixed bug in cnrma (dimnames(NP) error)Rob Scharp authored on 11/03/2010 19:03:38 |
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View5fcfed7
roll back to crlmm version 1.5.24Rob Scharp authored on 10/03/2010 01:27:04 |
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Viewa13f66d
several updates for ff. new classes for affy/illumina processing. More s4-style codeRob Scharp authored on 08/03/2010 04:46:55 |
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View7e1d14d
begin adding support for ff. added an option to use poeRob Scharp authored on 20/02/2010 23:39:45 |
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View50f393b
updated copy number vignette. this version was used in the methods manuscript.Rob Scharp authored on 12/01/2010 16:00:31 |
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View7ae22f5
updated first half of inst/scripts/copynumber.Rnw, as well as a few of the help filesRob Scharp authored on 23/12/2009 10:57:10 |
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View82be31d
updates to namespace, cnrma-functionsRob Scharp authored on 14/12/2009 14:12:43 |