March 25, 2010

updates to genotype, crlmmIlluminaRS, and crlmmCopynumber

Rob Scharp authored on 25/03/2010 13:01:51
March 19, 2010

updated genotype and crlmmIlluminaRS functions. suppressing integer overflow warnings that do not appear to be relevant

Rob Scharp authored on 19/03/2010 16:00:25
March 11, 2010

fixed bug in cnrma (dimnames(NP) error)

Rob Scharp authored on 11/03/2010 19:03:38

added genotype function to cnrma-functions. Added AllClasses.R file to set ff_matrix and ffdf classes

Rob Scharp authored on 11/03/2010 11:02:23
March 10, 2010

roll back to crlmm version 1.5.24

Rob Scharp authored on 10/03/2010 01:27:04
March 8, 2010

several updates for ff. new classes for affy/illumina processing. More s4-style code

Rob Scharp authored on 08/03/2010 04:46:55
December 3, 2009

updates for compatability with oligoClasses

Rob Scharp authored on 03/12/2009 13:02:58
November 19, 2009

cleaned up a few of the classes. defined new class called CNSet to take the place of CrlmmSet

Rob Scharp authored on 19/11/2009 14:59:04
November 15, 2009

numerous changes to the code and class definitions used for copy number estimation

Rob Scharp authored on 15/11/2009 10:46:23
June 25, 2009

added classes/methods for intermediate files and copy number analysis; added wrapper for preprocessing and genotypes.

Rob Scharp authored on 25/06/2009 12:54:08
March 2, 2009

Fixing problems due to different versions of the source

Benilton Carvalho authored on 02/03/2009 13:38:41