March 30, 2011
Viewb59e832

genotype function is a wrapper for constructAffy, snprmaAffy, cnrmaAffy, and genotypeAffy. the *Affy functions are not currently exported.

Rob Scharp authored on 30/03/2011 19:27:38
View16fadf1

Add vignettes for copy number analysis. Add crlmmGT2.R file

Rob Scharp authored on 30/03/2011 02:41:00
View284565d

make gender an ff object in genotype function for Affy

Rob Scharp authored on 30/03/2011 02:40:42
View5b19b0f

crlmmGT2 <- rscrlmmGT2. Removed rscrlmmGT2.

Rob Scharp authored on 30/03/2011 02:40:33
View970a0fd

edits to posteriorMean.snp

Rob Scharp authored on 30/03/2011 02:40:28
Viewf0f8ba1

Rewrote illumina_copynumber vignette. Add functions and docmentation for constructInf, preprocessInf, and genotypeInf.

Rob Scharp authored on 30/03/2011 02:40:07
March 18, 2011
Viewcfa9fbb

Check batch early in genotype function. Add genotypeRS function to genotype Illumina data. Fix stop message in getVarInEnv -- do not try to print envir.

Rob Scharp authored on 18/03/2011 01:57:30
Viewdd44a16

add scale.sd option to computePosteriorMeans

Rob Scharp authored on 18/03/2011 01:57:07
View740c93c

Fix bug in shrinkGenotypeSummaries for batch.index

Rob Scharp authored on 18/03/2011 01:57:02
View86e551f

fixed cyclic namespace dependency by updating version dependencies in DESCRIPTION, and updating other bioc packages

Rob Scharp authored on 18/03/2011 01:56:56
March 10, 2011
Viewac0c6e8

add scale.sd option to computePosteriorMeans

Rob Scharp authored on 10/03/2011 19:30:48
View5239f88

comment code for computing the grand intercept and slope -- need to shrink genotype summaries first

Rob Scharp authored on 10/03/2011 19:30:44
Viewae69ab2

fixed cyclic namespace dependency by updating version dependencies in DESCRIPTION, and updating other bioc packages

Rob Scharp authored on 10/03/2011 19:30:40
March 2, 2011
Viewaa4a7e0

Fix bug in shrinkGenotypeSummaries for batch.index

Rob Scharp authored on 02/03/2011 00:59:08
Viewc75c54c

fixed cyclic namespace dependency by updating version dependencies in DESCRIPTION, and updating other bioc packages

Rob Scharp authored on 02/03/2011 00:59:03