March 30, 2011
Viewb59e832

genotype function is a wrapper for constructAffy, snprmaAffy, cnrmaAffy, and genotypeAffy. the *Affy functions are not currently exported.

Rob Scharp authored on 30/03/2011 19:27:38
View5b19b0f

crlmmGT2 <- rscrlmmGT2. Removed rscrlmmGT2.

Rob Scharp authored on 30/03/2011 02:40:33
Viewe29775f

bumped version

Rob Scharp authored on 30/03/2011 02:40:22
Viewf0f8ba1

Rewrote illumina_copynumber vignette. Add functions and docmentation for constructInf, preprocessInf, and genotypeInf.

Rob Scharp authored on 30/03/2011 02:40:07
March 12, 2011
View5ca9422

fix version number

Rob Scharp authored on 12/03/2011 19:56:08
Viewa0b5fda

change cnSet$SNR and cnSet$SKW to numeric (previously ff)

Rob Scharp authored on 12/03/2011 19:56:02
March 10, 2011
View70878f9

Create the function rawCopynumber that aliases totalCopynumber

Rob Scharp authored on 10/03/2011 19:30:54
Viewac0c6e8

add scale.sd option to computePosteriorMeans

Rob Scharp authored on 10/03/2011 19:30:48
View5239f88

comment code for computing the grand intercept and slope -- need to shrink genotype summaries first

Rob Scharp authored on 10/03/2011 19:30:44
March 2, 2011
View1766acd

v 1.9.15 includes bugfix in shrinkGenotypeSummaries

Rob Scharp authored on 02/03/2011 00:59:13
Viewc75c54c

fixed cyclic namespace dependency by updating version dependencies in DESCRIPTION, and updating other bioc packages

Rob Scharp authored on 02/03/2011 00:59:03
February 18, 2011
View1cf3d6b

bumped version to 1.9.14

Rob Scharp authored on 18/02/2011 19:17:59
February 16, 2011
View453e688

commit after bioc rebase

Rob Scharp authored on 16/02/2011 16:19:11
January 20, 2011
View4c729c3

Cleaning up... importing isPackageLoaded() from oligoClasses

Benilton Carvalho authored on 20/01/2011 18:33:39
January 10, 2011
View5768232

Updating dependencies on oligoClasses

Benilton Carvalho authored on 10/01/2011 18:18:40