November 17, 2012
View a3b625d

merge with collab branch containing fix for dqrls and bug-fix for computeRBaf that can misalign sample index with batch index (when batch is not in alphabetical order)

Rob Scharp authored on 17/11/2012 15:24:46
September 19, 2012
View 3be95c2

Merge branch 'collab'

Rob Scharp authored on 19/09/2012 12:31:51
July 8, 2012
View 063b3d1

Merge branch 'collab'

Rob Scharp authored on 08/07/2012 19:00:03
January 17, 2012
View 7c0c9ac

Merge branch 'mymac'

Rob Scharp authored on 17/01/2012 19:13:44
March 31, 2011
View 669c6a9

Update copy number vignettes. Pass cdfName to cnrmaAffy function.

Rob Scharp authored on 31/03/2011 16:52:11
March 30, 2011
View 16fadf1

Add vignettes for copy number analysis. Add crlmmGT2.R file

Rob Scharp authored on 30/03/2011 02:41:00
March 10, 2011
View 0621b63

Add link to compendium in copy number vignette.

Rob Scharp authored on 10/03/2011 19:31:02
February 16, 2011
View 453e688

commit after bioc rebase

Rob Scharp authored on 16/02/2011 16:19:11
View 937a9f3

add open and close statements inside processCEL2. Fix NR in rscrlmmGT2

Rob Scharp authored on 16/02/2011 15:59:37
View 3acddff

Remove code used for testing MIN.SAMPLES

Rob Scharp authored on 16/02/2011 15:59:02
View 9e769c7

Add temporary code for checking MIN.SAMPLE in copynumber vignette

Rob Scharp authored on 16/02/2011 15:58:50
View 8b529b4

commented another cat statement inside readIdatFiles

Rob Scharp authored on 16/02/2011 15:58:47
View cd35bbe

Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 16/02/2011 15:58:28
View c717577

Bug in copy number accessors fixed.

Rob Scharp authored on 16/02/2011 15:58:23
View 5133e59

Fix bug in CB accessor for nonpolymorphic markers

Rob Scharp authored on 16/02/2011 15:58:19