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import ffdf class from oligoClassesRob Scharp authored on 20/10/2010 13:43:26 |
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Update summarizeNps function for illumina platformRob Scharp authored on 20/10/2010 13:43:06 |
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Remove help file for ffdf-class. Adding documentation for CNSet accessors.Rob Scharp authored on 04/10/2010 02:21:59 |
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importing ff_matrix class from oligoClassesRob Scharp authored on 30/08/2010 19:41:12 |
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more pruning of NAMESPACERob Scharp authored on 30/08/2010 19:41:10 |
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cleaned some of the temporary exports in the namespaceRob Scharp authored on 30/08/2010 19:41:08 |
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Revised accesors in methods-AssayData -- some of the conflicts resolved by hand during rebase were incorrectRob Scharp authored on 30/08/2010 19:41:03 |
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CB estimates were NA for SNP indices were mixed with NP indices. Bug was fixed in the ACN functionRob Scharp authored on 30/08/2010 19:40:54 |
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Fixed several bugs in the CA, CB, ACN functions. Updated the copynumber vignetteRob Scharp authored on 30/08/2010 19:40:42 |
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constructIlluminaAssayData allows for either ff or matrices. Fixed bug in accessors for medians, mads, ...Rob Scharp authored on 30/08/2010 19:40:33 |
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Export plotCNSetLM for debugging.Rob Scharp authored on 30/08/2010 19:40:28 |
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Exporting list and ffdf classes so that lM<- assignment worksRob Scharp authored on 30/08/2010 19:40:16 |
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git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@49010 bc3139a8-67e5-0310-9ffc-ced21a209358unknown authored on 25/08/2010 02:32:48 |
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methods Ns, medians, corr, and mads return arrays.Rob Scharp authored on 21/08/2010 02:50:19 |
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Added citation to crlmmCopynumber. Deleted many of the commented functions in cnrma-functions.RRob Scharp authored on 21/08/2010 02:50:15 |