April 7, 2009
View 0788262

added cdfName argument to computeCopynumber

Rob Scharp authored on 07/04/2009 10:01:06
April 6, 2009
View cfdeb14

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@38494 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 06/04/2009 05:19:27
April 4, 2009
View a83b4ac

fixed location/scale for chromosome X in oneBatch function

Rob Scharp authored on 04/04/2009 20:10:07
April 3, 2009
View e446e21

added a few items to the TODOs

Rob Scharp authored on 03/04/2009 09:37:26
March 30, 2009
View d6533a6

added arguments save.it, load.it and intensityFile to crlmmIllumina()

unknown authored on 30/03/2009 06:01:55
View cd8b85b

added code to handle illumina snp array data

unknown authored on 30/03/2009 02:25:09
March 29, 2009
View 5dab0fa

updated cnrma function and the copy number vignette

Rob Scharp authored on 29/03/2009 19:59:40
March 28, 2009
View 67e99be

Incorporating changes recommended by reviewer

Benilton Carvalho authored on 28/03/2009 18:14:19
View ec428e7

Modified warning message to give one reason recalibration may not happen

Benilton Carvalho authored on 28/03/2009 15:08:16
View 95d22b5

crlmm returns a SnpSet object

Benilton Carvalho authored on 28/03/2009 04:43:33
March 25, 2009
View f8af2ff

changes to computeCopynumber function. Exporting wrapper for extracting dates from the cel file header

Rob Scharp authored on 25/03/2009 13:12:49
March 15, 2009
View 5c8d6b1

assigned nu, phi, nu.se, and phi.se to environment created by user

Rob Scharp authored on 15/03/2009 10:20:41
March 14, 2009
View c027cd7

Fixed notes on 'no visible bindings'

Benilton Carvalho authored on 14/03/2009 15:03:05
View 37a8b36

instantiate snpflags as a list

Rob Scharp authored on 14/03/2009 10:19:07
March 7, 2009
View c255087

require high confidence score of genotypes for computing sufficient statistics

Rob Scharp authored on 07/03/2009 19:03:38