July 31, 2013
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merging from collab

Rob Scharp authored on 31/07/2013 01:37:34
November 17, 2012
Viewa3b625d

merge with collab branch containing fix for dqrls and bug-fix for computeRBaf that can misalign sample index with batch index (when batch is not in alphabetical order)

Rob Scharp authored on 17/11/2012 15:24:46
September 19, 2012
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Merge branch 'collab'

Rob Scharp authored on 19/09/2012 12:31:51
July 8, 2012
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Merge branch 'collab'

Rob Scharp authored on 08/07/2012 19:00:03
January 17, 2012
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Merge branch 'mymac'

Rob Scharp authored on 17/01/2012 19:13:44
March 31, 2011
View669c6a9

Update copy number vignettes. Pass cdfName to cnrmaAffy function.

Rob Scharp authored on 31/03/2011 16:52:11
March 30, 2011
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Add vignettes for copy number analysis. Add crlmmGT2.R file

Rob Scharp authored on 30/03/2011 02:41:00
March 10, 2011
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Add link to compendium in copy number vignette.

Rob Scharp authored on 10/03/2011 19:31:02
February 16, 2011
View453e688

commit after bioc rebase

Rob Scharp authored on 16/02/2011 16:19:11
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add open and close statements inside processCEL2. Fix NR in rscrlmmGT2

Rob Scharp authored on 16/02/2011 15:59:37
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Remove code used for testing MIN.SAMPLES

Rob Scharp authored on 16/02/2011 15:59:02
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Add temporary code for checking MIN.SAMPLE in copynumber vignette

Rob Scharp authored on 16/02/2011 15:58:50
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commented another cat statement inside readIdatFiles

Rob Scharp authored on 16/02/2011 15:58:47
Viewcd35bbe

Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 16/02/2011 15:58:28
Viewc717577

Bug in copy number accessors fixed.

Rob Scharp authored on 16/02/2011 15:58:23