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View7f14b4e
Removed helperFunctions.R. Added totalCopyNumber method to methods-CNSet.Rob Scharp authored on 30/08/2010 15:45:33 |
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View39be476
moved constructAssayData and constructFeatureData to cnrma-functions.RRob Scharp authored on 30/08/2010 15:45:27 |
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View348dfe4
Added a checks to see whether XY@assayData$X is 'ff' or 'ffdf' in preprocessInfinium2Rob Scharp authored on 30/08/2010 15:45:24 |
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Viewd656403
changes in preprocessInfinium2 to accomodate "humanomniexpress12v1b" platformRob Scharp authored on 30/08/2010 15:45:18 |
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View5681683
Changes to support humanomniexpress12v1b illumina platformRob Scharp authored on 30/08/2010 15:45:15 |
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View7434538
Updated copy number vignettes and copy number citation.Rob Scharp authored on 27/07/2010 03:02:03 |
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View6ec3ec4
Removed export of totalCopyNumber from namespace and totalCopyNumber method from methods-CNSetRob Scharp authored on 27/07/2010 03:01:41 |
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View86556c4
use explicit coercion of CA and CB to matrices in copyNumber methodRob Scharp authored on 27/07/2010 03:01:37 |
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View4c48a3d
Need to export ffdf and list class so that lM<- assignment works. Added totalCopyNumber method.Rob Scharp authored on 27/07/2010 03:01:34 |
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Viewc87212d
Added method totalCopyNumber to compute the total copy number for CNSet class, regardless of whether assay data elements are ff objects.Rob Scharp authored on 27/07/2010 03:01:30 |
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Viewdbee827
Exposed a few helper functions in the illumina_copynumber vignette. Modified the function construct.Rob Scharp authored on 27/07/2010 03:01:11 |
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Viewd41653d
fixed bug in copyNumber method for CNSet objectsRob Scharp authored on 27/05/2010 14:13:18 |
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Viewc2b6e3a
the inst/scripts/copynumber.pdf and inst/scripts/illumina_copynumber.pdf are updated. An example CNSetLM object is providedRob Scharp authored on 27/05/2010 13:41:50 |
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View551018e
Started debugging - memory spikeBenilton Carvalho authored on 16/04/2010 16:02:49 |
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Viewea66649
added a few Rd files. Removed metaArray from NAMESPACERob Scharp authored on 11/04/2010 16:10:26 |