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View729e92c
assigne basename(filenames) to sns if sns is missing in constructAffy function.Rob Scharp authored on 01/10/2011 04:45:05 |
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View18053f2
removed extraneous line in rowMADRob Scharp authored on 01/10/2011 04:44:43 |
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View531a14f
check that batch length is same as length of filenames in constructAffy. Add additional documentation for CNSet class man page.Rob Scharp authored on 30/04/2011 01:49:59 |
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View415a3b0
fit.lm4 returns a CNSet object if assayData elements are matricesRob Scharp authored on 08/04/2011 19:05:07 |
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View7cc879b
bug fix in 'computeSummary' functionRob Scharp authored on 03/04/2011 02:50:01 |
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View7978fa6
comment grand mean summaries in summarizeSnpsRob Scharp authored on 03/04/2011 02:49:55 |
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View669c6a9
Update copy number vignettes. Pass cdfName to cnrmaAffy function.Rob Scharp authored on 31/03/2011 16:52:11 |
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Viewb59e832
genotype function is a wrapper for constructAffy, snprmaAffy, cnrmaAffy, and genotypeAffy. the *Affy functions are not currently exported.Rob Scharp authored on 30/03/2011 19:27:38 |
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View16fadf1
Add vignettes for copy number analysis. Add crlmmGT2.R fileRob Scharp authored on 30/03/2011 02:41:00 |
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View284565d
make gender an ff object in genotype function for AffyRob Scharp authored on 30/03/2011 02:40:42 |
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View5b19b0f
crlmmGT2 <- rscrlmmGT2. Removed rscrlmmGT2.Rob Scharp authored on 30/03/2011 02:40:33 |
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View970a0fd
edits to posteriorMean.snpRob Scharp authored on 30/03/2011 02:40:28 |
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Viewf0f8ba1
Rewrote illumina_copynumber vignette. Add functions and docmentation for constructInf, preprocessInf, and genotypeInf.Rob Scharp authored on 30/03/2011 02:40:07 |
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Viewcfa9fbb
Check batch early in genotype function. Add genotypeRS function to genotype Illumina data. Fix stop message in getVarInEnv -- do not try to print envir.Rob Scharp authored on 18/03/2011 01:57:30 |
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Viewdd44a16
add scale.sd option to computePosteriorMeansRob Scharp authored on 18/03/2011 01:57:07 |