February 16, 2011
View 6e826f6

try splitIndicesByLength instead of splitIndicesByNode in genotype.Illumina

Rob Scharp authored on 16/02/2011 15:59:12
View 41c8695

export everything in namespace

Rob Scharp authored on 16/02/2011 15:58:43
View cd35bbe

Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 16/02/2011 15:58:28
View 0da02ee

update processCEL2 -- only read intensities for NP probes that are included in the npProbesFid object

Rob Scharp authored on 16/02/2011 15:56:39
January 20, 2011
View 4c729c3

Cleaning up... importing isPackageLoaded() from oligoClasses

Benilton Carvalho authored on 20/01/2011 18:33:39
November 18, 2010
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git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@50950 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 18/11/2010 05:31:36
November 15, 2010
View 1507ac0

Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 15/11/2010 14:22:42
View b0d9727

update processCEL2 -- only read intensities for NP probes that are included in the npProbesFid object

Rob Scharp authored on 15/11/2010 14:21:23
November 11, 2010
View 438088f

Bumped version.

Rob Scharp authored on 11/11/2010 04:13:40
View f3d4014

genotype function should be independent of annotation package version

Rob Scharp authored on 11/11/2010 04:13:23
View 4191b5f

Bug fix for estimation of copy number at nonpolymorphic loci on chromosome X.

Rob Scharp authored on 11/11/2010 04:13:08
View 3f40458

getFeatureData only returns features with chromosome annotation

Rob Scharp authored on 11/11/2010 04:13:03
October 20, 2010
View 94bdc2e

import ffdf class from oligoClasses

Rob Scharp authored on 20/10/2010 13:43:26
View 73fd737

Update summarizeNps function for illumina platform

Rob Scharp authored on 20/10/2010 13:43:06
October 4, 2010
View 6a6b67c

Remove help file for ffdf-class. Adding documentation for CNSet accessors.

Rob Scharp authored on 04/10/2010 02:21:59