August 30, 2010
View 56b783e

Revised accesors in methods-AssayData -- some of the conflicts resolved by hand during rebase were incorrect

Rob Scharp authored on 30/08/2010 19:41:03
View 97e1fa7

Removed setValidity method for CNSetLM

Rob Scharp authored on 30/08/2010 19:41:01
View 1b3b1c3

added open and close statements in Ns and corr accessors

Rob Scharp authored on 30/08/2010 19:40:57
View d5b39e2

CB estimates were NA for SNP indices were mixed with NP indices. Bug was fixed in the ACN function

Rob Scharp authored on 30/08/2010 19:40:54
View 8e2d935

my .emacs wants to remove white spaces at end of lines. no substantive changes here

Rob Scharp authored on 30/08/2010 19:40:50
View 0198a9a

Fixed several bugs in the CA, CB, ACN functions. Updated the copynumber vignette

Rob Scharp authored on 30/08/2010 19:40:42
View 3e4db4b

constructIlluminaAssayData allows for either ff or matrices. Fixed bug in accessors for medians, mads, ...

Rob Scharp authored on 30/08/2010 19:40:33
View 10b0407

moved totalCopyNumber method to oligoClasses package.

Rob Scharp authored on 30/08/2010 19:40:26
View f1e14c0

Removed tryCatch() statements in readIdatFiles. Restored previous implementation.

Rob Scharp authored on 30/08/2010 19:40:19
View 630adba

Exporting list and ffdf classes so that lM<- assignment works

Rob Scharp authored on 30/08/2010 19:40:16
August 26, 2010
View 5f18478

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@49042 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 26/08/2010 04:08:38
View d12c8b8

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@49041 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 26/08/2010 03:20:20
View 3375370

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@49037 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 26/08/2010 00:39:06
View a1a4312

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@49036 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 26/08/2010 00:27:53
August 25, 2010
View 8d6ca96

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@49035 bc3139a8-67e5-0310-9ffc-ced21a209358

unknown authored on 25/08/2010 23:53:32