November 15, 2010
View 8eaeb34

Try using bb <- getOption("ffbatchbytes") in genotype.Illumina

Rob Scharp authored on 15/11/2010 14:23:02
View 95a5f14

check if index.complete has length 1 to avoid annoying warning messages

Rob Scharp authored on 15/11/2010 14:22:56
View 1507ac0

Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 15/11/2010 14:22:42
View a268cdc

Bug in copy number accessors fixed.

Rob Scharp authored on 15/11/2010 14:21:58
View 197c791

Fix bug in CB accessor for nonpolymorphic markers

Rob Scharp authored on 15/11/2010 14:21:52
View 7a41ca3

fix for finding index of nonpolymorphic markers in genotype function

Rob Scharp authored on 15/11/2010 14:21:45
View 02a1063

Fix (2) writing of genotypes and confidence scores using ffcolapply

Rob Scharp authored on 15/11/2010 14:21:34
View e4db8f9

Fix writing of genotypes and confidence scores using ffcolapply

Rob Scharp authored on 15/11/2010 14:21:29
View b0d9727

update processCEL2 -- only read intensities for NP probes that are included in the npProbesFid object

Rob Scharp authored on 15/11/2010 14:21:23
View a2d9477

Update path to save processed data from scripts/copynumber.Rnw and scripts/illumina_copynumber for release version of vignette

Rob Scharp authored on 15/11/2010 14:21:17
View 0f74337

Update inst/scripts/Makefile to use R-2.12

Rob Scharp authored on 15/11/2010 14:21:10
View cb875a5

Updates to genotype function and fit.lm4

Rob Scharp authored on 15/11/2010 14:21:05
View f373895

update ACN function

Rob Scharp authored on 15/11/2010 14:20:57
View 07b12bc

bumped version to 1.9.6

Rob Scharp authored on 15/11/2010 14:20:48
November 11, 2010
View d3bb3c5

updating todo

Benilton Carvalho authored on 11/11/2010 12:22:25