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View29b13dc
bumped to v1.9.7
Rob Scharp authored on 15/11/2010 14:28:17
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Viewb3f0033
removed getOption() commands and save(callSet) from crlmm-illumina functions
Rob Scharp authored on 15/11/2010 14:28:13
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Viewc4ca152
copied affy and illumina vignettes to inst/doc
Rob Scharp authored on 15/11/2010 14:25:55
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Viewdc987d1
updated affy and illumina copy number vignettes
Rob Scharp authored on 15/11/2010 14:25:32
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View38cf01d
add check for missing.index length in illumina_copynumber vignette
Rob Scharp authored on 15/11/2010 14:24:50
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View65abb52
update makefile to use the R-devel for the illumina_copynumber vignette
Rob Scharp authored on 15/11/2010 14:24:45
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View87a5db6
added GT.CONF.THR argument to crlmmCopynumber
Rob Scharp authored on 15/11/2010 14:24:37
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View8a1d91d
Added colors for men/women for chrom X boxplots in copynumber vignette
Rob Scharp authored on 15/11/2010 14:24:29
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View816fce2
changed line in crlmm-illumina function processIDAT. bb <- getOption("ffbatchbytes")
Rob Scharp authored on 15/11/2010 14:24:24
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View102e46c
removed commented functions: bias2, biasAdj, etc.
Rob Scharp authored on 15/11/2010 14:24:18
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View8247639
Restored getFeatureData from experimental branch
Rob Scharp authored on 15/11/2010 14:24:13
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View49bb00f
Updated copynumber and illumina_copynumber vignettes for v1.9.6
Rob Scharp authored on 15/11/2010 14:24:02
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View5bd5a61
cn marker 'CN_974939' is not part of the npProbesFid annotation file in genomewidesnp6Crlmm. Exclude this marker when tallying the number of NAs for the nonpolymorphic markers on chromosome X.
Rob Scharp authored on 15/11/2010 14:23:08
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