August 21, 2010
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Removed some of the commented code in the nuphiAllele function

Rob Scharp authored on 21/08/2010 02:47:38
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Commented out computation of standard errors for coefficients. Replaced crossprod(solve...) with call to the Fortran library dqrls

Rob Scharp authored on 21/08/2010 02:47:35
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commented sums of squared residuals calculation in nuphiAllele2.

Rob Scharp authored on 21/08/2010 02:47:30
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Added weighted.lm argument to fit.lm1, fit.lm2 and computeCN. Added computeCN.

Rob Scharp authored on 21/08/2010 02:47:27
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Fixed bug in fit.lm functions -- the correlations were assigned incorrectly.

Rob Scharp authored on 21/08/2010 02:47:23
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Added accessors for linear model parameters.

Rob Scharp authored on 21/08/2010 02:47:15
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Edited Makefile as in Peng's compendium

Rob Scharp authored on 21/08/2010 02:47:07
August 2, 2010
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Updated citation to include the Biostatistics copy number manuscript

Rob Scharp authored on 02/08/2010 08:52:27
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Updated illumina_copynumber vignette

Rob Scharp authored on 02/08/2010 08:52:23
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Intermediate files are loaded within the constructIlluminaCNSet function.

Rob Scharp authored on 02/08/2010 08:52:18
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Exporting crlmmIllumina2. Added constructIlluminaCNSet function.

Rob Scharp authored on 02/08/2010 08:52:15
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Added constructIlluminaFeatureData and constructIlluminaAssayData to cnrma-functions

Rob Scharp authored on 02/08/2010 08:52:11
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Swapped the release illumina_copynumber vignette with devel (release more current)

Rob Scharp authored on 02/08/2010 08:52:06
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v 1.7.8 updated changes/description

Rob Scharp authored on 02/08/2010 08:51:59
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Assign column names to ff object assay data elements prior to contructing CNSetLM

Rob Scharp authored on 02/08/2010 08:51:57