March 30, 2011
View16fadf1

Add vignettes for copy number analysis. Add crlmmGT2.R file

Rob Scharp authored on 30/03/2011 02:41:00
March 10, 2011
View0621b63

Add link to compendium in copy number vignette.

Rob Scharp authored on 10/03/2011 19:31:02
February 16, 2011
View453e688

commit after bioc rebase

Rob Scharp authored on 16/02/2011 16:19:11
View937a9f3

add open and close statements inside processCEL2. Fix NR in rscrlmmGT2

Rob Scharp authored on 16/02/2011 15:59:37
View3acddff

Remove code used for testing MIN.SAMPLES

Rob Scharp authored on 16/02/2011 15:59:02
View9e769c7

Add temporary code for checking MIN.SAMPLE in copynumber vignette

Rob Scharp authored on 16/02/2011 15:58:50
View8b529b4

commented another cat statement inside readIdatFiles

Rob Scharp authored on 16/02/2011 15:58:47
Viewcd35bbe

Finalize updates to copynumber and illumina_copynumber vignettes for v1.8.3 updates

Rob Scharp authored on 16/02/2011 15:58:28
Viewc717577

Bug in copy number accessors fixed.

Rob Scharp authored on 16/02/2011 15:58:23
View5133e59

Fix bug in CB accessor for nonpolymorphic markers

Rob Scharp authored on 16/02/2011 15:58:19
Viewe28ca8c

fix for finding index of nonpolymorphic markers in genotype function

Rob Scharp authored on 16/02/2011 15:58:14
Viewfd65d6c

Fix writing of genotypes and confidence scores using ffcolapply

Rob Scharp authored on 16/02/2011 15:58:10
View6ff105c

update processCEL2 -- only read intensities for NP probes that are included in the npProbesFid object

Rob Scharp authored on 16/02/2011 15:58:06
View19d18ec

Bug in copy number accessors fixed.

Rob Scharp authored on 16/02/2011 15:56:57
View0380310

Fix bug in CB accessor for nonpolymorphic markers

Rob Scharp authored on 16/02/2011 15:56:52