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View12e6763
more pruning of NAMESPACE
Rob Scharp authored on 30/08/2010 19:41:10
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Viewc6d091f
cleaned some of the temporary exports in the namespace
Rob Scharp authored on 30/08/2010 19:41:08
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Viewa521b1a
removed generics and methods for sigma2A and sigma2B
Rob Scharp authored on 30/08/2010 19:41:06
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View56b783e
Revised accesors in methods-AssayData -- some of the conflicts resolved by hand during rebase were incorrect
Rob Scharp authored on 30/08/2010 19:41:03
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View97e1fa7
Removed setValidity method for CNSetLM
Rob Scharp authored on 30/08/2010 19:41:01
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Viewe33a04e
.gitignore ignores copynumber-* and copynumber.log
Rob Scharp authored on 30/08/2010 19:40:59
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View1b3b1c3
added open and close statements in Ns and corr accessors
Rob Scharp authored on 30/08/2010 19:40:57
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Viewd5b39e2
CB estimates were NA for SNP indices were mixed with NP indices. Bug was fixed in the ACN function
Rob Scharp authored on 30/08/2010 19:40:54
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View8e2d935
my .emacs wants to remove white spaces at end of lines. no substantive changes here
Rob Scharp authored on 30/08/2010 19:40:50
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Viewdfb77c2
bumped version to 1.7.13
Rob Scharp authored on 30/08/2010 19:40:48
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View39f4ced
bumped to version 1.7.13
Rob Scharp authored on 30/08/2010 19:40:46
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View0198a9a
Fixed several bugs in the CA, CB, ACN functions. Updated the copynumber vignette
Rob Scharp authored on 30/08/2010 19:40:42
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View3e4db4b
constructIlluminaAssayData allows for either ff or matrices. Fixed bug in accessors for medians, mads, ...
Rob Scharp authored on 30/08/2010 19:40:33
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View52e58a4
Export plotCNSetLM for debugging.
Rob Scharp authored on 30/08/2010 19:40:28
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View10b0407
moved totalCopyNumber method to oligoClasses package.
Rob Scharp authored on 30/08/2010 19:40:26
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