git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@44545 bc3139a8-67e5-0310-9ffc-ced21a209358
Benilton Carvalho authored on 07/02/2010 15:58:25
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@@ -382,3 +382,6 @@ is stored in the assayData slot. |
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2010-02-05 M. Ritchie - committed version 1.5.24 |
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* preprocessed allele A and B intensities from copy number and regular SNPs are now saved separately by crlmmIllumina(). The 'intensityFile' argument has been replaced by 'snpFile' and 'cnFile'. |
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* updated the following man pages to reflect the above changes and added in current references: crlmmIllumina.Rd, crlmm.Rd and readIdatFiles.Rd |
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+ |
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+2010-02-07 B. Carvalho - committed version 1.5.25 |
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+ * Updated requirement of affyio to support Win64 |
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@@ -8,7 +8,7 @@ Maintainer: Benilton S Carvalho <bcarvalh@jhsph.edu>, Robert Scharpf <rscharpf@j |
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Description: Faster implementation of CRLMM specific to SNP 5.0 and 6.0 arrays, as well as a copy number tool specific to 5.0, 6.0, and Illumina platforms |
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License: Artistic-2.0 |
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Depends: methods, Biobase (>= 2.7.2), R (>= 2.11.0), oligoClasses (>= 1.9.21) |
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-Imports: affyio, preprocessCore, utils, stats, genefilter, splines, mvtnorm, ellipse, SNPchip |
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+Imports: affyio (>= 1.15.2), preprocessCore, utils, stats, genefilter, splines, mvtnorm, ellipse, SNPchip |
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Suggests: hapmapsnp5, hapmapsnp6, genomewidesnp5Crlmm (>= 1.0.2),genomewidesnp6Crlmm (>= 1.0.2), snpMatrix |
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Collate: AllGenerics.R |
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methods-AlleleSet.R |