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modify to new biocViews to DESCRIPTION file

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@87035 bc3139a8-67e5-0310-9ffc-ced21a209358

Sonali Arora authored on 04/03/2014 22:12:21
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 Package: crlmm
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 Type: Package
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-Title: Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays.
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-Version: 1.21.5
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-Date: Mon Feb  3 09:02:42 EST 2014
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-Author: Benilton S Carvalho, Robert Scharpf, Matt Ritchie, Ingo Ruczinski, Rafael A Irizarry
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-Maintainer: Benilton S Carvalho <Benilton.Carvalho@cancer.org.uk>, Robert Scharpf <rscharpf@jhsph.edu>, Matt Ritchie <mritchie@wehi.EDU.AU>
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-Description: Faster implementation of CRLMM specific to SNP 5.0 and 6.0 arrays, as well as a copy number tool specific to 5.0, 6.0, and Illumina platforms
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+Title: Genotype Calling (CRLMM) and Copy Number Analysis tool for
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+        Affymetrix SNP 5.0 and 6.0 and Illumina arrays.
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+Version: 1.21.6
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+Date: Mon Feb 3 09:02:42 EST 2014
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+Author: Benilton S Carvalho, Robert Scharpf, Matt Ritchie, Ingo
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+        Ruczinski, Rafael A Irizarry
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+Maintainer: Benilton S Carvalho <Benilton.Carvalho@cancer.org.uk>,
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+        Robert Scharpf <rscharpf@jhsph.edu>, Matt Ritchie
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+        <mritchie@wehi.EDU.AU>
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+Description: Faster implementation of CRLMM specific to SNP 5.0 and 6.0
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+        arrays, as well as a copy number tool specific to 5.0, 6.0, and
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+        Illumina platforms
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 License: Artistic-2.0
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-Depends: R (>= 2.14.0), oligoClasses (>= 1.21.12), preprocessCore (>= 1.17.7)
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+Depends: R (>= 2.14.0), oligoClasses (>= 1.21.12), preprocessCore (>=
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+        1.17.7)
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 LinkingTo: preprocessCore (>= 1.17.7)
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-Imports: methods,
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-         Biobase (>= 2.15.4),
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-         BiocGenerics,
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-         affyio (>= 1.23.2),
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-         illuminaio,
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-         ellipse,
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-         mvtnorm,
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-         splines,
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-         stats,
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-         SNPchip,
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-         utils,
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-	 lattice,
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-	 ff,
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-	 foreach,
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-         RcppEigen (>= 0.3.1.2.1),
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-	 matrixStats,
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-	 VGAM
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-Suggests: hapmapsnp6,
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-          genomewidesnp6Crlmm (>= 1.0.7),
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-          GGdata,
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-          snpStats,
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-	  ellipse,
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-	  RUnit,
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-	  VGAM
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-Collate: AllGenerics.R
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-	 AllClasses.R
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-	 methods-AssayData.R
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-	 methods-CNSet.R
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-	 methods-CNSetLM.R
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-	 methods-eSet.R
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-         methods-SnpSuperSet.R
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-	 methods-PredictionRegion.R
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-         cnrma-functions.R
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-	 cnset-accessors.R
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-         crlmm-functions.R
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-	 crlmmGT2.R
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-         crlmm-illumina.R
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-         krlmm.R
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-	 snprma-functions.R
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-         utils.R
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-         zzz.R
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-	 test_crlmm_package.R
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+Imports: methods, Biobase (>= 2.15.4), BiocGenerics, affyio (>=
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+        1.23.2), illuminaio, ellipse, mvtnorm, splines, stats, SNPchip,
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+        utils, lattice, ff, foreach, RcppEigen (>= 0.3.1.2.1),
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+        matrixStats, VGAM
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+Suggests: hapmapsnp6, genomewidesnp6Crlmm (>= 1.0.7), GGdata, snpStats,
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+        ellipse, RUnit, VGAM
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+Collate: AllGenerics.R AllClasses.R methods-AssayData.R methods-CNSet.R
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+        methods-CNSetLM.R methods-eSet.R methods-SnpSuperSet.R
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+        methods-PredictionRegion.R cnrma-functions.R cnset-accessors.R
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+        crlmm-functions.R crlmmGT2.R crlmm-illumina.R krlmm.R
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+        snprma-functions.R utils.R zzz.R test_crlmm_package.R
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 LazyLoad: yes
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-biocViews: Microarray, Preprocessing, SNP, Bioinformatics,CopyNumberVariants
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 ## Local Variables:
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 ## time-stamp-pattern: "8/Date: %3a %3b %2d %02H:%02M:%02S %Z %:y\n"
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 ## End:
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+biocViews: Microarray, Preprocessing, SNP, CopyNumberVariation