git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@56866 bc3139a8-67e5-0310-9ffc-ced21a209358
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@@ -18,7 +18,7 @@ readIDAT(idatFile) |
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} |
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\details{ |
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-This fuction returns a list containing summarised intensities and other |
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+This function returns a list containing summarised intensities and other |
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information extracted from a single .idat file. |
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The \code{readIdatFiles} function makes use of \code{readIDAT} to read |
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@@ -29,7 +29,7 @@ Thanks to Keith Baggerly who providing this code. |
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\value{ |
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list which includes item \code{Quants} which contains average intensity (\code{Mean}), |
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- number of beads (\code{NBeads}) and measure of variability (\code{SD}) for |
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+ number of beads (\code{NBeads}) and a measure of variability (\code{SD}) for |
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each bead type on the array. |
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} |
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@@ -39,11 +39,11 @@ Thanks to Keith Baggerly who providing this code. |
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genotyping BeadChips. Bioinformatics. 2009 Oct 1;25(19):2621-3. |
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} |
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-\author{Keith Baggerly, with modifications from Matt Ritchie} |
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+\author{Keith Baggerly, with modifications by Matt Ritchie} |
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\examples{ |
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- |
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-#idatlist = readIDAT("4019585367_A_Grn.idat") |
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- |
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+#idatdata = readIDAT("4019585367_A_Grn.idat") |
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+#names(idatdata |
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+#idatdata$Quants[1:5,] |
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} |
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\keyword{IO} |