git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/crlmm@43679 bc3139a8-67e5-0310-9ffc-ced21a209358
Benilton Carvalho authored on 22/12/2009 14:05:41
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Package: crlmm |
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Type: Package |
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Title: Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays. |
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-Version: 1.5.14 |
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+Version: 1.5.16 |
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Date: 2009-12-03 |
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Author: Rafael A Irizarry, Benilton S Carvalho <bcarvalh@jhsph.edu>, Robert Scharpf <rscharpf@jhsph.edu>, Matt Ritchie <mritchie@wehi.edu.au> |
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Maintainer: Benilton S Carvalho <bcarvalh@jhsph.edu>, Robert Scharpf <rscharpf@jhsph.edu>, Matt Ritchie <mritchie@wehi.EDU.AU> |
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Description: Faster implementation of CRLMM specific to SNP 5.0 and 6.0 arrays, as well as a copy number tool specific to 5.0, 6.0, and Illumina platforms |
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License: Artistic-2.0 |
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-Depends: methods, Biobase (>= 2.5.5), R (>= 2.10.0) |
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-Imports: affyio, preprocessCore, utils, stats, genefilter, splines, mvtnorm, oligoClasses (>= 1.9.9), ellipse, methods, SNPchip, oligoClasses, IRanges |
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+Depends: methods, Biobase (>= 2.7.2), R (>= 2.11.0) |
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+Imports: affyio, preprocessCore, utils, stats, genefilter, splines, mvtnorm, oligoClasses (>= 1.9.20), ellipse, methods, SNPchip, IRanges (>= 1.5.21) |
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Suggests: hapmapsnp5, hapmapsnp6, genomewidesnp5Crlmm (>= 1.0.2),genomewidesnp6Crlmm (>= 1.0.2), snpMatrix |
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Collate: AllGenerics.R |
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methods-AlleleSet.R |