\title{quantile normalize nonpolymorphic markers}
\description{Quantile normalize nonpolymorphic markers to hapmap reference distribution}
cnrmaAffy(cnSet, seed = 1, verbose = TRUE)

    Object of class \code{CNSet}
    Random number seed
  Returns logical.  Normalized intensities are written to the alleleA
  \code{ff_matrix} stored in the \code{CNSet} assayData.
\author{ R. Scharpf}

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