# Generated by roxygen2: do not edit by hand S3method(print,corral) S3method(print,corralm) export(add_embeddings2scelist) export(all_are) export(biplot_corral) export(compsvd) export(corral) export(corral_mat) export(corral_preproc) export(corral_sce) export(corralm) export(corralm_matlist) export(corralm_sce) export(earthmover_dist) export(get_pct_var_exp_svd) export(get_weights) export(list2mat) export(na2zero) export(pairwise_rv) export(plot_embedding) export(plot_embedding_sce) export(rv) export(scal_var) export(scal_var_mat) export(sce2matlist) export(trim_matdist) export(var_stabilize) import(SingleCellExperiment) import(ggplot2) import(ggthemes) import(gridExtra) import(pals) import(reshape2) importClassesFrom(Matrix,dgCMatrix) importClassesFrom(MultiAssayExperiment,MultiAssayExperiment) importClassesFrom(SingleCellExperiment,SingleCellExperiment) importFrom(Matrix,Matrix) importFrom(Matrix,colSums) importFrom(Matrix,rowSums) importFrom(MultiAssayExperiment,assays) importFrom(MultiAssayExperiment,experiments) importFrom(MultiAssayExperiment,intersectRows) importFrom(SingleCellExperiment,colData) importFrom(SingleCellExperiment,reducedDim) importFrom(SummarizedExperiment,assay) importFrom(ggthemes,scale_color_few) importFrom(grDevices,colorRampPalette) importFrom(graphics,plot) importFrom(irlba,irlba) importFrom(methods,is) importFrom(stats,quantile) importFrom(stats,var) importFrom(transport,wasserstein) importFrom(utils,combn)