consensusSeekeR: Detection of consensus regions inside a group of experiments using genomic positions and genomic ranges ===================== [](https://github.com/adeschen/consensusSeekeR/actions/workflows/check-bioc.yaml) [](https://codecov.io/gh/adeschen/consensusSeekeR) [](https://opensource.org/licenses/Artistic-2.0) This R package compares multiple narrowPeak data from different experiments to extract common peak regions. The size of the analyzed region is adjustable, as well as the number of experiences in which a peak must be present to tag a potential region as a consensus region. If needed, the consensus regions can be extended to cover the entire regions of enclosed peaks. ## Bioconductor Package ## [](http://bioconductor.org/packages/release/bioc/html/consensusSeekeR.html "Bioconductor status") consensusSeekeR is now an official package of [Bioconductor](http://bioconductor.org/). The current release can be directly downloaded from their website: [Current release](http://bioconductor.org/packages/consensusSeekeR/) ## Citing ## If you use this package for a publication, we would ask you to cite the following: >Samb R, Khadraoui K, Belleau P, et al. (2015) Using informative Multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling. Statistical Applications in Genetics and Molecular Biology. Published online before print December 10, 2015. <a href="http://dx.doi.org/10.1515/sagmb-2014-0098">doi:10.1515/sagmb-2014-0098</a> ## Authors ## [Astrid Desch&ecirc;nes](http://ca.linkedin.com/in/astriddeschenes "Astrid Desch&ecirc;nes"), [Fabien Claude Lamaze](http://ca.linkedin.com/in/fabienlamaze/en "Fabien Claude Lamaze"), [Pascal Belleau](http://ca.linkedin.com/in/pascalbelleau "Pascal Belleau") and [Arnaud Droit](http://ca.linkedin.com/in/drarnaud "Arnaud Droit") ## Maintainer ## [Astrid Desch&ecirc;nes](http://ca.linkedin.com/in/astriddeschenes "Astrid Desch&ecirc;nes") ## License ## This package and the underlying **consensusSeekeR** code are distributed under the Artistic license 2.0. You are free to use and redistribute this software. For more information on Artistic 2.0 License see [http://opensource.org/licenses/Artistic-2.0](http://opensource.org/licenses/Artistic-2.0) ## Bugs/Feature requests ## If you have any bugs or feature requests, [let us know](https://github.com/adeschen/consensusSeekeR/issues). Thanks!