@@ -209,16 +209,10 @@ setMethod(

         eta <- factorized$posterior$geneDistribution

         nGByTS <- factorized$counts$geneDistribution

-        

         if (is.null(newCounts)) {

             newCounts <- counts

         } else {

             newCounts <- .processCounts(newCounts)

-            beta <- params(celdaMod)$beta

-            L <- params(celdaMod)$L

-            y <- celdaMod@clusters$y

-            phi <- .rowSumByGroup(newCounts, group = y, L = L) + beta

-            phi <- normalizeCounts(phi, normalize = "proportion")

         }

         if (nrow(newCounts) != nrow(counts)) {

             stop("newCounts should have the same number of rows as counts.")

@@ -315,8 +309,6 @@ setMethod(

         newCounts <- counts

     } else {

         newCounts <- .processCounts(newCounts)

-        phi <- .rowSumByGroup(newCounts, group = y, L = L) + beta

-        phi <- normalizeCounts(phi, normalize = "proportion")

     }

     if (nrow(newCounts) != nrow(counts)) {

         stop("newCounts should have the same number of rows as counts.")