Package: celda
Title: CEllular Latent Dirichlet Allocation
Version: 1.6.1
Authors@R: c(person("Joshua", "Campbell", email = "camp@bu.edu",
    role = c("aut", "cre")),
    person("Sean", "Corbett", email = "scorbett@bu.edu", role = c("aut")),
    person("Yusuke", "Koga", email="ykoga07@bu.edu", role = c("aut")),
    person("Shiyi", "Yang", email="syyang@bu.edu", role = c("aut")),
    person("Eric", "Reed", email="reeder@bu.edu", role = c("aut")),
    person("Zhe", "Wang", email="zhe@bu.edu", role = c("aut")))
Description: Utilizing Bayesian hierarchical models to analyze single-cell genomic data.
Depends: R (>= 3.6)
VignetteBuilder: knitr
Imports: plyr, foreach, ggplot2, RColorBrewer, grid, scales, gtable,
        grDevices, graphics, matrixStats, doParallel, digest, methods,
        reshape2, MAST, S4Vectors, data.table,
        Rcpp, RcppEigen, uwot, enrichR, stringi, SummarizedExperiment,
        MCMCprecision, ggrepel, Rtsne, withr, dendextend, ggdendro,
        pROC, scater (>= 1.14.4), scran, SingleCellExperiment, dbscan,
        DelayedArray, Seurat, stringr, Matrix, ComplexHeatmap, multipanelfigure,
        circlize
Suggests: testthat, knitr, roxygen2, rmarkdown, biomaRt, covr,
        BiocManager, BiocStyle, M3DExampleData, TENxPBMCData
LinkingTo: Rcpp, RcppEigen
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
BugReports: https://github.com/campbio/celda/issues
biocViews: SingleCell, GeneExpression, Clustering, Sequencing, Bayesian
NeedsCompilation: yes