1. celaref
  2. Graph
Graph of celaref
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  • 3b42a01 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:07:01 -0400;
  • 54fc418 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 11:07:01 -0400;
  • 7c68791 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:03:35 -0400;
  • 0ef9783 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 11:03:35 -0400;
  • c651e53 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:18:14 -0400;
  • 2556728 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:18:14 -0400;
  • f3e2d16 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:50:25 +0000;
  • a0f210f (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:50:25 +0000;
  • 1962f4d Pass serialized S4 instances thru updateObject() by Hervé Pagès <hpages.on.github@gmail.com> 2021-11-20 23:20:25 -0500;
  • 44b0e1a bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:46:08 +0000;
  • 45b360b (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:46:08 +0000;
  • 81048a2 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:37:13 +0000;
  • 633ad23 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:37:13 +0000;
  • e29a5df bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:37:46 -0400;
  • 446dc60 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:37:46 -0400;
  • 03fcc15 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:18:36 +0000;
  • 2ab7e2f (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:18:36 +0000;
  • e5d81d0 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:43:18 -0400;
  • 89082dd (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:11:18 -0400;
  • d258a25 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:15:51 -0400;
  • c5ddafe (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:12 -0400;
  • c94376f import delayedArray by Sarah Williams <sarah.williams1@monash.edu> 2019-04-18 09:43:16 +1000;
  • 33a919b use counts assay, support hd5/delayedArray SEs by Sarah Williams <sarah.williams1@monash.edu> 2019-04-17 17:04:25 +1000;
  • 6a40f67 fixed function doco link by Sarah Williams <sarah.williams1@monash.edu> 2019-04-17 09:51:13 +1000;
  • 49335ed can use rankmetrics with violin plots, doco fixes by Sarah Williams <sarah.williams1@monash.edu> 2019-04-15 17:06:04 +1000;
  • 44b57e7 updated vignette by Sarah Williams <sarah.williams1@monash.edu> 2019-04-14 18:21:36 +1000;
  • 0515a2e version bump no change by Sarah Williams <sarah.williams1@monash.edu> 2019-04-03 16:24:48 +1100;
  • 829382c Merge branch 'master' of git.bioconductor.org:packages/celaref by Sarah Williams <sarah.williams1@monash.edu> 2019-04-03 16:16:03 +1100;
  • abaedc1 fox bioconductor repo conflicts by Sarah Williams <sarah.williams1@monash.edu> 2019-04-02 12:10:19 +1100;
  • d8fc0be fox bioconductor repo conflicts by Sarah Williams <sarah.williams1@monash.edu> 2019-04-02 12:10:19 +1100;
  • 863149e update views, version numx by Sarah Williams <sarah.williams1@monash.edu> 2019-04-02 11:28:32 +1100;
  • 145828b subset functions by Sarah Williams <sarah.williams1@monash.edu> 2019-04-02 10:56:32 +1100;
  • 68af72e version bump by Sarah Williams <sarah.williams1@monash.edu> 2019-03-21 10:40:07 +1100;
  • f76fbf5 version bump by Sarah Williams <sarah.williams1@monash.edu> 2019-03-21 10:40:07 +1100;
  • 98b001a merged github and bioconductor versionsx by Sarah Williams <sarah.williams1@monash.edu> 2019-03-20 11:20:41 +1100;
  • 7df0e43 merged github and bioconductor versionsx by Sarah Williams <sarah.williams1@monash.edu> 2019-03-20 11:20:41 +1100;
  • 6ba3cba fix unit test filename by Sarah Williams <sarah.williams@biointeractive.novalocal> 2019-03-19 16:34:47 +1100;
  • 9441358 fix unit test filename by Sarah Williams <sarah.williams@biointeractive.novalocal> 2019-03-19 16:34:47 +1100;
  • e07bcd8 Actual fix for singleCellAssay coercion/as bug? A few unit tests by Sarah Williams <sarah.williams1@monash.edu> 2019-03-18 16:01:01 +1100;
  • d538075 Actual fix for singleCellAssay coercion/as bug? A few unit tests by Sarah Williams <sarah.williams1@monash.edu> 2019-03-18 16:01:01 +1100;
  • 5a4eb8f loading helper function tests by Sarah Williams <sarah.williams1@monash.edu> 2019-02-05 17:33:15 +1100;
  • 395c0ff loading helper function tests by Sarah Williams <sarah.williams1@monash.edu> 2019-02-05 17:33:15 +1100;
  • 035e32d fix - import 'as' coercion method from MAST internally (no need for library(MAST) in sparse matrix branch) by Sarah Williams <sarah.williams1@monash.edu> 2019-01-16 11:08:55 +1100;
  • 7ddc3e6 fix - import 'as' coercion method from MAST internally (no need for library(MAST) in sparse matrix branch) by Sarah Williams <sarah.williams1@monash.edu> 2019-01-16 11:08:55 +1100;
  • 5e4a446 (origin/RELEASE_3_8, RELEASE_3_8) Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:24:34 -0500;
  • bfa5322 Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:24:21 -0500;
  • 750cc96 Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:24:21 -0500;
  • 76eb16f don't coerce to dense matrix when calcing pofgenes by Sarah Williams <sarah.williams1@monash.edu> 2018-12-17 14:18:00 +1100;
  • 661fa1b don't coerce to dense matrix when calcing pofgenes by Sarah Williams <sarah.williams1@monash.edu> 2018-12-17 14:18:00 +1100;
  • 6dbe580 sparse matrix support by Sarah Williams <sarah.williams1@monash.edu> 2018-12-12 14:32:45 +1100;
  • 353312b sparse matrix support by Sarah Williams <sarah.williams1@monash.edu> 2018-12-12 14:32:45 +1100;
  • 728d806 tidied rankmetrics options by Sarah Williams <sarah.williams1@monash.edu> 2018-12-09 20:36:41 +1100;
  • 08863a7 tidied rankmetrics options by Sarah Williams <sarah.williams1@monash.edu> 2018-12-09 20:36:41 +1100;
  • 62c1a8a make_ref_similarity_names now also accepts rankmetrics by Sarah Williams <sarah.williams1@monash.edu> 2018-11-26 17:03:21 +1100;
  • 737cf27 make_ref_similarity_names now also accepts rankmetrics by Sarah Williams <sarah.williams1@monash.edu> 2018-11-26 17:03:21 +1100;
  • 04df819 Added new rankmetrics for evalation, and n parameter. by Sarah Williams <sarah.williams1@monash.edu> 2018-11-26 15:54:26 +1100;
  • 2819b6a Added new rankmetrics for evalation, and n parameter. by Sarah Williams <sarah.williams1@monash.edu> 2018-11-26 15:54:26 +1100;
  • da65fb0 convert coldata/rowdata to data.frame by Sarah Williams <sarah.williams1@monash.edu> 2018-11-25 14:27:46 +1100;
  • bb2f834 convert coldata/rowdata to data.frame by Sarah Williams <sarah.williams1@monash.edu> 2018-11-25 14:27:46 +1100;
  • 07a0d89 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:39 -0400;
  • ab11fed bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:39 -0400;
  • a2ffb05 bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:42:10 -0400;
  • 40330aa bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:42:10 -0400;
  • b66c5a6 installation details, version bump by Sarah Williams <sarah.williams1@monash.edu> 2018-08-18 13:44:19 +1000;
  • 142f263 installation details, version bump by Sarah Williams <sarah.williams1@monash.edu> 2018-08-18 13:44:19 +1000;
  • 22b4b6d warnings and stops by Sarah Williams <sarah.williams1@monash.edu> 2018-08-18 13:20:19 +1000;
  • 60b3a7b warnings and stops by Sarah Williams <sarah.williams1@monash.edu> 2018-08-18 13:20:19 +1000;
  • 54d1086 Removed [celaref] specification from doco \links by Sarah Williams <sarah.williams1@monash.edu> 2018-08-16 13:01:26 +1000;
  • 5642d9d Removed [celaref] specification from doco \links by Sarah Williams <sarah.williams1@monash.edu> 2018-08-16 13:01:26 +1000;
  • 862e141 whitespace, version bump by Sarah Williams <sarah.williams1@monash.edu> 2018-08-16 11:20:11 +1000;
  • e877d86 whitespace, version bump by Sarah Williams <sarah.williams1@monash.edu> 2018-08-16 11:20:11 +1000;
  • 6ade600 use seq_len() by Sarah Williams <sarah.williams1@monash.edu> 2018-08-15 16:22:17 +1000;
  • 52047ac use seq_len() by Sarah Williams <sarah.williams1@monash.edu> 2018-08-15 16:22:17 +1000;
  • 0dfc8d0 shortern lines, don't try to multithread on windows by Sarah Williams <sarah.williams1@monash.edu> 2018-08-12 20:57:16 +1000;
  • f72447b shortern lines, don't try to multithread on windows by Sarah Williams <sarah.williams1@monash.edu> 2018-08-12 20:57:16 +1000;
  • 01b95f9 rm html, gitignore github by Sarah Williams <sarah.williams1@monash.edu> 2018-08-07 09:09:55 +1000;
  • 5ddd0c8 rm html, gitignore github by Sarah Williams <sarah.williams1@monash.edu> 2018-08-07 09:09:55 +1000;
  • 9d96fe5 doco installation, sessionInfo by Sarah Williams <sarah.williams1@monash.edu> 2018-08-07 09:07:04 +1000;
  • 350d70c doco installation, sessionInfo by Sarah Williams <sarah.williams1@monash.edu> 2018-08-07 09:07:04 +1000;
  • 90dfe7b importing eh data package for vignette by Sarah Williams <sarah.williams1@monash.edu> 2018-08-07 08:40:34 +1000;
  • b9098bf importing eh data package for vignette by Sarah Williams <sarah.williams1@monash.edu> 2018-08-07 08:40:34 +1000;
  • 9efa984 Reduce size, mv vignette data out by Sarah Williams <sarah.williams1@monash.edu> 2018-08-02 16:11:25 +1000;
  • 74fec1d Reduce size, mv vignette data out by Sarah Williams <sarah.williams1@monash.edu> 2018-08-02 16:11:25 +1000;
  • bd4f433 added inst/script dir for bioc by Sarah Williams <sarah.williams1@monash.edu> 2018-07-27 11:35:20 +1000;
  • 601e796 added inst/script dir for bioc by Sarah Williams <sarah.williams1@monash.edu> 2018-07-27 11:35:20 +1000;
  • eccb706 bugfix: report reciprocal hits where its fwd hit not above random by Sarah Williams <sarah.williams1@monash.edu> 2018-07-27 09:39:00 +1000;
  • 9e4dcf8 bugfix: report reciprocal hits where its fwd hit not above random by Sarah Williams <sarah.williams1@monash.edu> 2018-07-27 09:39:00 +1000;
  • 3996c65 passing CMD and Bioc checks by Sarah Williams <sarah.williams1@monash.edu> 2018-07-25 14:28:05 +1000;
  • 944dd12 passing CMD and Bioc checks by Sarah Williams <sarah.williams1@monash.edu> 2018-07-25 14:28:05 +1000;
  • a403e4f Fixed mismatch in example doco by Sarah Williams <sarah.williams1@monash.edu> 2018-07-24 11:53:39 +1000;
  • f2d0760 Fixed mismatch in example doco by Sarah Williams <sarah.williams1@monash.edu> 2018-07-24 11:53:39 +1000;
  • bdeb484 New output described in vignette by Sarah Williams <sarah.williams1@monash.edu> 2018-07-09 10:26:40 +1000;
  • d135e6c New output described in vignette by Sarah Williams <sarah.williams1@monash.edu> 2018-07-09 10:26:40 +1000;
  • ece5427 Adding reciprocal test, and vs random distribution test by Sarah Williams <sarah.williams1@monash.edu> 2018-07-06 17:06:41 +1000;
  • 6e65cc5 Adding reciprocal test, and vs random distribution test by Sarah Williams <sarah.williams1@monash.edu> 2018-07-06 17:06:41 +1000;
  • 89f857f Removed uneeded parameters, added sensible error messages by Sarah Williams <sarah.williams1@monash.edu> 2018-07-02 10:50:43 +1000;
  • 0fbcdc3 Removed uneeded parameters, added sensible error messages by Sarah Williams <sarah.williams1@monash.edu> 2018-07-02 10:50:43 +1000;
  • c3637e6 Bugfix: multiple match groups reported in order again by Sarah Williams <sarah.williams1@monash.edu> 2018-06-29 14:32:02 +1000;
  • 0c863f8 Bugfix: multiple match groups reported in order again by Sarah Williams <sarah.williams1@monash.edu> 2018-06-29 14:32:02 +1000;
  • fa1f634 changes docoed by Sarah Williams <sarah.williams1@monash.edu> 2018-06-19 21:16:30 +1000;