Name Mode Size
..
BSmooth.R 100644 7 kb
BSmooth.fstat.R 100644 9 kb
BSmooth.tstat.R 100644 6 kb
BSseqStat_class.R 100644 4 kb
BSseqTstat_class.R 100644 3 kb
BSseq_class.R 100644 14 kb
BSseq_utils.R 100644 8 kb
DelayedArray_utils.R 100644 4 kb
combine.R 100644 9 kb
dmrFinder.R 100644 4 kb
fisher.R 100644 3 kb
getStats.R 100644 3 kb
gof_stats.R 100644 3 kb
hasGRanges.R 100644 6 kb
hdf5_utils.R 100644 2 kb
permutations.R 100644 12 kb
plotting.R 100644 15 kb
read.bismark.R 100644 5 kb
read.bsmooth.R 100644 22 kb
utils.R 100644 2 kb
README.md
# R package: bsseq This is the developer version of Bioconductor package [bsseq](http://bioconductor.org/packages/devel/bioc/html/bsseq.html). Install in R as: ```r source('http://bioconductor.org/biocLite.R') useDevel(TRUE) biocLite('bsseq') ``` ## Software status | Resource: | Bioconductor | Travis CI | | ------------- | ------------------- | ------------- | | _Platforms:_ | _Multiple_ | _Linux_ | | R CMD check | <a href="http://bioconductor.org/checkResults/release/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/release/bioc/bsseq.svg" alt="Build status"></a> (release)</br><a href="http://bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/devel/bioc/bsseq.svg" alt="Build status"></a> (devel) | <a href="https://travis-ci.org/kasperdanielhansen/bsseq"><img src="https://travis-ci.org/kasperdanielhansen/bsseq.svg" alt="Build status"></a> | | Test coverage | | <a href="https://codecov.io/github/kasperdanielhansen/bsseq?branch=master"><img src="https://codecov.io/github/kasperdanielhansen/bsseq/coverage.svg?branch=master" alt="Coverage Status"/></a> | |