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Update badges in README

Peter Hickey authored on 22/01/2019 23:58:19
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@@ -11,5 +11,5 @@ BiocManager::install("bsseq", version = "devel")
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 | Resource:     | Bioconductor        | Travis CI     |
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 | ------------- | ------------------- | ------------- |
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 | _Platforms:_  | _Multiple_          | _Linux_       |
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-| R CMD check   | <a href="http://bioconductor.org/checkResults/release/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/release/bioc/bsseq.svg" alt="Build status"></a> (release)</br><a href="http://bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/devel/bioc/bsseq.svg" alt="Build status"></a> (devel) | <a href="https://travis-ci.org/kasperdanielhansen/bsseq"><img src="https://travis-ci.org/kasperdanielhansen/bsseq.svg" alt="Build status"></a> |
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-| Test coverage |                     | <a href="https://codecov.io/github/kasperdanielhansen/bsseq?branch=master"><img src="https://codecov.io/github/kasperdanielhansen/bsseq/coverage.svg?branch=master" alt="Coverage Status"/></a>   |                  |
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+| R CMD check   | <a href="http://bioconductor.org/checkResults/release/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/release/bioc/bsseq.svg" alt="Build status"></a> (release)</br><a href="http://bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/devel/bioc/bsseq.svg" alt="Build status"></a> (devel) | <a href="https://travis-ci.org/hansenlab/bsseq"><img src="https://travis-ci.org/hansenlab/bsseq.svg" alt="Build status"></a> |
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+| Test coverage |                     | <a href="https://codecov.io/github/hansenlab/bsseq?branch=master"><img src="https://codecov.io/github/hansenlab/bsseq/coverage.svg?branch=master" alt="Coverage Status"/></a>   |                  |
Browse code

Update installation instructions in README

Peter Hickey authored on 18/07/2018 00:35:25 • GitHub committed on 18/07/2018 00:35:25
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@@ -2,9 +2,8 @@
2 2
 This is the developer version of Bioconductor package [bsseq](http://bioconductor.org/packages/devel/bioc/html/bsseq.html).  Install in R as:
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 ```r
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-source('http://bioconductor.org/biocLite.R')
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-useDevel(TRUE)
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-biocLite('bsseq')
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+install.packages("BiocManager")
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+BiocManager::install("bsseq", version = "devel")
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 ```
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 ## Software status
Browse code

README updated

Kasper Daniel Hansen authored on 16/10/2017 18:43:52
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@@ -7,8 +7,6 @@ useDevel(TRUE)
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 biocLite('bsseq')
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 ```
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-## R CMD check results
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-
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 ## Software status
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 | Resource:     | Bioconductor        | Travis CI     |
Browse code

fixed conflict

From: Kasper Daniel Hansen <kasperdanielhansen@gmail.com>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@110074 bc3139a8-67e5-0310-9ffc-ced21a209358

khansen authored on 29/10/2015 19:12:43
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@@ -3,8 +3,16 @@ This is the developer version of Bioconductor package [bsseq](http://bioconducto
3 3
 
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 ```r
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 source('http://bioconductor.org/biocLite.R')
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-biocLite(bsseq')
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+useDevel(TRUE)
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+biocLite('bsseq')
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 ```
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 ## R CMD check results
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-Bioconductor: [Multiple platform build/check report](http://master.bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/)
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+
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+## Software status
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+
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+| Resource:     | Bioconductor        | Travis CI     |
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+| ------------- | ------------------- | ------------- |
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+| _Platforms:_  | _Multiple_          | _Linux_       |
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+| R CMD check   | <a href="http://bioconductor.org/checkResults/release/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/release/bioc/bsseq.svg" alt="Build status"></a> (release)</br><a href="http://bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/"><img border="0" src="http://bioconductor.org/shields/build/devel/bioc/bsseq.svg" alt="Build status"></a> (devel) | <a href="https://travis-ci.org/kasperdanielhansen/bsseq"><img src="https://travis-ci.org/kasperdanielhansen/bsseq.svg" alt="Build status"></a> |
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+| Test coverage |                     | <a href="https://codecov.io/github/kasperdanielhansen/bsseq?branch=master"><img src="https://codecov.io/github/kasperdanielhansen/bsseq/coverage.svg?branch=master" alt="Coverage Status"/></a>   |                  |
Browse code

Commit made by the Bioconductor Git-SVN bridge. Consists of 1 commit.

Commit information:

Commit id: 7ff5e7a228ab99a9c7cddbef2fd059c5c7e8b6cc

updated README

Committed by: Kasper Daniel Hansen
Author Name: Kasper Daniel Hansen
Commit date: 2014-10-02 22:19:16 -0400
Author date: 2014-10-02 22:19:16 -0400


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@94889 bc3139a8-67e5-0310-9ffc-ced21a209358

khansen authored on 03/10/2014 02:19:25
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@@ -7,4 +7,4 @@ biocLite(bsseq')
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 ```
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 ## R CMD check results
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-Bioconductor: Multiple platform build/check [report](http://master.bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/)
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+Bioconductor: [Multiple platform build/check report](http://master.bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/)
Browse code

Commit made by the Bioconductor Git-SVN bridge. Consists of 1 commit.

Commit information:

Commit id: b77623a3a6db038a562864481ddd2002160bca8c

updated README

Committed by: Kasper Daniel Hansen
Author Name: Kasper Daniel Hansen
Commit date: 2014-10-02 22:18:41 -0400
Author date: 2014-10-02 22:18:41 -0400


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@94888 bc3139a8-67e5-0310-9ffc-ced21a209358

khansen authored on 03/10/2014 02:18:48
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@@ -7,4 +7,4 @@ biocLite(bsseq')
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 ```
8 8
 
9 9
 ## R CMD check results
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-Bioconductor: [Multiple platform build/check report]("http://master.bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/")
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+Bioconductor: Multiple platform build/check [report](http://master.bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/)
Browse code

Commit made by the Bioconductor Git-SVN bridge. Consists of 1 commit.

Commit information:

Commit id: de0d320a05e8792e414a88e9eae503a30b2204d1

updated README

Committed by: Kasper Daniel Hansen
Author Name: Kasper Daniel Hansen
Commit date: 2014-10-02 22:17:29 -0400
Author date: 2014-10-02 22:17:29 -0400


git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@94887 bc3139a8-67e5-0310-9ffc-ced21a209358

khansen authored on 03/10/2014 02:17:38
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@@ -1,6 +1,10 @@
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-# bsseq
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+# R package: bsseq
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+This is the developer version of Bioconductor package [bsseq](http://bioconductor.org/packages/devel/bioc/html/bsseq.html).  Install in R as:
2 3
 
3
-The devel repository for bsseq is at
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-
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-https://github.com/kasperdanielhansen/bsseq
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+```r
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+source('http://bioconductor.org/biocLite.R')
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+biocLite(bsseq')
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+```
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+## R CMD check results
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+Bioconductor: [Multiple platform build/check report]("http://master.bioconductor.org/checkResults/devel/bioc-LATEST/bsseq/")
Browse code

Commit made by the Bioconductor Git-SVN bridge. Consists of 1 commit(s).

Commit information:

Commit id: 5a8e5f8cb3cae8bc55c3eaa3be4b6cbfe977aac5
Commit message:
added README.md
Committed by Kasper Daniel Hansen <kasperdanielhansen at gmail.com>
Commit date: 2014-02-24T20:21:55-08:00

From: Bioconductor Git-SVN Bridge <bioc-sync@bioconductor.org>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@86771 bc3139a8-67e5-0310-9ffc-ced21a209358

khansen authored on 25/02/2014 04:22:22
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@@ -0,0 +1,6 @@
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+# bsseq
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+
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+The devel repository for bsseq is at
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+
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+https://github.com/kasperdanielhansen/bsseq
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+