git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@70488 bc3139a8-67e5-0310-9ffc-ced21a209358
khansen authored on 13/10/2012 16:48:16
git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/bsseq@67929 bc3139a8-67e5-0310-9ffc-ced21a209358
m.carlson authored on 20/07/2012 17:45:09
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+@article{Hansen:2012,
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+ author = {Hansen, Kasper D and Langmead, Benjamin and Irizarry, Rafael A},
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+ title = {{BSmooth: from whole genome bisulfite sequencing reads to differentially
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+ methylated regions}}, |
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+ journal = {Genome Biology},
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+ year = {2012},
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+ note = {In press}
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+} |
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+ |
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+ |
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+@article{Tung:2012,
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+ author = {Tung, Jenny and Barreiro, Luis B and Johnson, Zachary P and Hansen, Kasper D and
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+ Michopoulos, Vasiliki and Toufexis, Donna and Michelini, Katelyn and Wilson, Mark |
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+ E and Gilad, Yoav}, |
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+ title = {{Social environment is associated with gene regulatory variation in the rhesus
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+ macaque immune system}}, |
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+ journal = {PNAS},
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+ year = {2012},
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+ volume = {109},
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+ number = {17},
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+ pages = {6490--6495},
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+ doi = {10.1073/pnas.1202734109},
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+ pubmed = {22493251}
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+} |
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+ |
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+@article{Hansen:2011,
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+ author = {Hansen, Kasper D and Timp, Winston and Corrada Bravo, Hector and Sabunciyan,
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+ Sarven and Langmead, Benjamin and McDonald, Oliver G. and Wen, Bo and Wu, Hao and |
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+ Liu, Yun and Diep, Dihn and Briem, Eirikur and Zhang, Kun and Irizarry, Rafael A |
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+ and Feinberg, Andrew P}, |
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+ title = {{Generalized Loss of Stability of Epigenetic Domains Across Cancer Types}},
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+ journal = {Nature Genetics},
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+ year = {2011},
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+ Volume = {43},
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+ Number = {8},
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+ pages = {768--775},
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+ doi = {10.1038/ng.865},
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+ pubmed = {21706001}
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+} |
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+ |
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+@article{Hansen:2011rna,
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+ author = {Hansen, Kasper D and Wu, Zhijin and Irizarry, Rafael A and Leek, Jeffrey T},
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+ title = {{Sequencing technology does not eliminate biological variability}},
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+ journal = {Nature Biotechnology},
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+ year = {2011},
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+ volume = {29},
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+ number = {7},
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| 48 |
+ pages = {572--573},
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+ doi = {10.1038/nbt.1910},
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+ pubmed = {21747377}
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+} |
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+ |
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+@article{Lister:2009,
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+ author = {Lister, Ryan and Pelizzola, Mattia and Dowen, Robert H and Hawkins, R David and
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+ Hon, Gary C and Tonti-Filippini, Julian and Nery, Joseph R and Lee, Leonard and |
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+ Ye, Zhen and Ngo, Que-Minh and Edsall, Lee and Antosiewicz-Bourget, Jessica and |
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+ Stewart, Ron and Ruotti, Victor and Millar, A Harvey and Thomson, James A and Ren, |
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+ Bing and Ecker, Joseph R}, |
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+ title = {{Human DNA methylomes at base resolution show widespread epigenomic differences}},
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+ journal = {Nature},
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+ year = {2009},
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+ volume = {462},
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+ number = {7271},
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+ pages = {315--322},
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+ doi = {10.1038/nature08514},
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+ pubmed = {19829295}
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+} |
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+ |
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+@article{Agresti:1998,
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+ author = {Agresti, Alan and Coull, Brent},
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+ title = {{Approximate Is Better than "Exact" for Interval Estimation of Binomial
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+ Proportions}}, |
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+ journal = {The American Statistician},
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+ year = {1998},
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+ volume = {52},
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+ number = {2},
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+ pages = {119--126},
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+ url = {http://www.jstor.org/stable/2685469}
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+} |
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+ |
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+ |
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+ |
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+% Local Variables: |
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+% eval: (setq fill-column 100) |
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+% End: |
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+ |