April 8, 2018
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Merge remote-tracking branch 'bioc/master'

Peter Hickey authored on 08/04/2018 19:10:33
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Re-sync with DelayedArray

Peter Hickey authored on 08/04/2018 18:47:50
January 11, 2018
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Update BS.chr22 assays to use new DelayedArray internal representation (which changed in DelayedArray 0.5.11), and re-serialize it.

Hervé Pagès authored on 11/01/2018 07:51:59
October 30, 2017
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bump x.y.z versions to odd y after creation of RELEASE_3_6 branch

Hervé Pagès authored on 30/10/2017 16:52:20
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bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch

Hervé Pagès authored on 30/10/2017 16:39:45
October 17, 2017
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version bump

Kasper Daniel Hansen authored on 17/10/2017 02:21:38
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moved vignettes into Rmd

Kasper Daniel Hansen authored on 17/10/2017 02:21:02
October 16, 2017
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Version bump to test Bioc git

Kasper Daniel Hansen authored on 16/10/2017 18:54:12
September 18, 2017
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- Use new 'maxgap' and 'minoverlap' defaults in "findOverlaps" method for hasGRanges objects. - Remove "subsetByOverlaps" methods for hasGRanges objects. They are redundant with the default "subsetByOverlaps" method defined in the IRanges package. The default method works out-of-the-box on any object that supports findOverlaps() and linear subsetting ([), which is the case for hasGRanges objects.

Hervé Pagès authored on 18/09/2017 15:02:27
July 21, 2017
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version 1.13.6 from GitHub. Numerous bugfixes, including one critical

Kasper D. Hansen authored on 21/07/2017 12:17:16
June 27, 2017
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Bump version of packages that define RangedSummarizedExperiment derivatives (direct or indirect). Will help get rid of those class definitions that are cached on the user machines and became stale after GenomicRangesORGRangesList was renamed GenomicRanges_OR_GRangesList (on June 18, commit 130486).

Herve Pages authored on 27/06/2017 17:05:27
May 6, 2017
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resync with latest changes to DelayedArray

Herve Pages authored on 06/05/2017 06:23:15
April 29, 2017
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use pruning.mode="coarse" instead of force=TRUE when calling seqlevels() setter

Herve Pages authored on 29/04/2017 20:29:37
April 24, 2017
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bump x.y.z versions to odd y after creation of 3_5 branch

Herve Pages authored on 24/04/2017 19:50:57
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bump x.y.z versions to even y prior to creation of 3_5 branch

Herve Pages authored on 24/04/2017 19:25:24