... | ... |
@@ -1,5 +1,5 @@ |
1 | 1 |
Package: bsseq |
2 |
-Version: 1.19.2 |
|
2 |
+Version: 1.19.3 |
|
3 | 3 |
Encoding: UTF-8 |
4 | 4 |
Title: Analyze, manage and store bisulfite sequencing data |
5 | 5 |
Description: A collection of tools for analyzing and visualizing bisulfite |
... | ... |
@@ -25,10 +25,10 @@ Imports: |
25 | 25 |
data.table (>= 1.11.8), |
26 | 26 |
S4Vectors, |
27 | 27 |
R.utils (>= 2.0.0), |
28 |
- DelayedMatrixStats (>= 1.3.6), |
|
28 |
+ DelayedMatrixStats (>= 1.5.2), |
|
29 | 29 |
permute, |
30 | 30 |
limma, |
31 |
- DelayedArray (>= 0.7.15), |
|
31 |
+ DelayedArray (>= 0.9.8), |
|
32 | 32 |
Rcpp, |
33 | 33 |
BiocParallel, |
34 | 34 |
BSgenome, |
... | ... |
@@ -25,7 +25,7 @@ importFrom(graphics, "abline", "axis", "layout", "legend", "lines", |
25 | 25 |
import(parallel) |
26 | 26 |
importFrom(locfit, "locfit", "lp") |
27 | 27 |
importFrom(DelayedMatrixStats, "rowSds", "rowVars", "colMeans2", "colSums2", |
28 |
- "rowSums2", "rowMeans2", "rowAlls", "rowsum", "colsum") |
|
28 |
+ "rowSums2", "rowMeans2", "rowAlls") |
|
29 | 29 |
|
30 | 30 |
importFrom(scales, "alpha") |
31 | 31 |
importClassesFrom(Biobase, "AnnotatedDataFrame") |