Browse code

adding a temporary manpage

Kasper Daniel Hansen authored on 30/10/2018 01:26:28
Showing3 changed files

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@@ -235,12 +235,12 @@ BSmooth <- function(BSseq,
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         #       (implicitly) only support in-memory or HDF5Array backends.
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         #       However, we retain it for now (e.g., fstArray backend would
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         #       use this until a dedicated branch was implemented).
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-        coef_sink <- DelayedArray:::RealizationSink(dim(M), type = "double")
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+        coef_sink <- DelayedArray::RealizationSink(dim(M), type = "double")
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         on.exit(close(coef_sink), add = TRUE)
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         sink_lock <- ipcid()
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         on.exit(ipcremove(sink_lock), add = TRUE)
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         if (keep.se) {
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-            se.coef_sink <- DelayedArray:::RealizationSink(
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+            se.coef_sink <- DelayedArray::RealizationSink(
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                 dim(M),
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                 type = "double")
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             on.exit(close(se.coef_sink), add = TRUE)
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@@ -57,7 +57,7 @@
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     #       minfi:::.highestType(x)
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     x_types <- vapply(x, DelayedArray::type, character(1L))
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     ans_type <- typeof(do.call("c", lapply(x_types, vector)))
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-    sink <- DelayedArray:::RealizationSink(
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+    sink <- DelayedArray::RealizationSink(
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         dim = c(length(ans_rowRanges), sum(vapply(x, ncol, integer(1L)))),
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         type = ans_type)
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     on.exit(close(sink))
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@@ -267,11 +267,11 @@
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         #       (implicitly) only support in-memory or HDF5Array backends.
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         #       However, we retain it for now (e.g., fstArray backend would use
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         #       this until a dedicated branch was implemented).
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-        M_sink <- DelayedArray:::RealizationSink(
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+        M_sink <- DelayedArray::RealizationSink(
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             dim = ans_dim,
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             type = "integer")
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         on.exit(close(M_sink), add = TRUE)
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-        Cov_sink <- DelayedArray:::RealizationSink(
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+        Cov_sink <- DelayedArray::RealizationSink(
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             dim = ans_dim,
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             type = "integer")
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         on.exit(close(Cov_sink), add = TRUE)