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Use S4Vectors:::normarg_names() instead of S4Vectors:::normalize_names_replacement_value()

Hervé Pagès authored on 12/06/2019 15:24:37
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@@ -1,5 +1,5 @@
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 Package: bsseq
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-Version: 1.21.0
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+Version: 1.21.1
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 Encoding: UTF-8
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 Title: Analyze, manage and store bisulfite sequencing data
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 Description: A collection of tools for analyzing and visualizing bisulfite
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@@ -23,7 +23,7 @@ Imports:
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     locfit,
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     gtools,
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     data.table (>= 1.11.8),
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-    S4Vectors,
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+    S4Vectors (>= 0.23.11),
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     R.utils (>= 2.0.0),
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     DelayedMatrixStats (>= 1.5.2),
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     permute,
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@@ -118,7 +118,7 @@ setReplaceMethod(
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 )
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 set_FWIRanges_names <- function(x, value) {
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-    x@NAMES <- S4Vectors:::normalize_names_replacement_value(value, x)
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+    x@NAMES <- S4Vectors:::normarg_names(value, class(x), length(x))
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     # NOTE: No need to validate an FWIRanges object after setting its names so
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     #       this should be safe.
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     x