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colGrid() and rowGrid() moved to DelayedMatrixStats as of v1.3.4

Peter Hickey authored on 29/06/2018 14:30:47
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@@ -25,7 +25,7 @@ Imports:
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     data.table,
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     S4Vectors,
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     R.utils (>= 2.0.0),
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-    DelayedMatrixStats (>= 1.3.1),
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+    DelayedMatrixStats (>= 1.3.4),
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     permute,
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     limma,
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     DelayedArray (>= 0.7.15),
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@@ -79,30 +79,6 @@ setMethod("dimnames", "arrayRealizationSink", function(x) {
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     dimnames(x@result_envir$result)
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 })
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-# Helper functions for setting up ArrayGrid instances --------------------------
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-
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-# NOTE: Copy of minfi:::colGrid()
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-# TODO: Perhaps move this to DelayedMatrixStats?
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-colGrid <- function(x) {
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-    block_maxlen <- max(nrow(x),
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-                        DelayedArray:::get_default_block_maxlength(type(x)))
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-    spacings <- DelayedArray:::get_spacings_for_linear_capped_length_blocks(
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-        refdim = dim(x),
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-        block_maxlen = block_maxlen)
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-    RegularArrayGrid(dim(x), spacings)
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-}
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-
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-# NOTE: Copy of minfi:::rowGrid()
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-# TODO: Perhaps move this to DelayedMatrixStats?
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-rowGrid <- function(x) {
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-    block_maxlen <- max(ncol(x),
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-                        DelayedArray:::get_default_block_maxlength(type(x)))
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-    spacings <- DelayedArray:::get_spacings_for_hypercube_capped_length_blocks(
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-        refdim = dim(x),
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-        block_maxlen = block_maxlen)
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-    RegularArrayGrid(dim(x), spacings)
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-}
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-
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 # Advanced block processing routines -------------------------------------------
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 # NOTE: Copy of minfi:::blockApplyWithRealization()