Name Mode Size
R 040000
inst 040000
longtests 040000
man 040000
src 040000
tests 040000
vignettes 040000
.BBSoptions 100644 0 kb
.Rbuildignore 100644 0 kb
.gitignore 100644 0 kb
DESCRIPTION 100644 1 kb
LICENSE 100644 34 kb
Makefile 100644 8 kb
NAMESPACE 100644 0 kb
NEWS 100644 0 kb
README.md 100644 1 kb
R_front 100644 10 kb
biodb_ext.yml 100644 0 kb
README.md
# biodbNci An R package for accessing biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS API, based on R package/framework [biodb](https://github.com/pkrog/biodb/). ## Introduction This package is an extension of [biodb](https://github.com/pkrog/biodb/) that implements a connector to biodbNci, a library for connecting to the National Cancer Institute (USA) CACTUS Database. ## Installation Install the latest version of this package by running the following commands: ```r if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install('biodbNci') ``` ## Examples To instantiate a connector to NCI CACTUS, a library for connecting to the National Cancer Institute (USA) CACTUS Database, run: ```r mybiodb <- boidb::newInst() conn <- mybiodb$getFactory()$createConn('nci.cactus') mybiodb$terminate() ``` ## Documentation To get documentation on the implemented connector, run the following command in R: ```r ?biodbNci::NciCactusConn ``` ## Citations CADD Group Chemoinformatics Tools and User Services (CACTUS), National Cancer Institute, at <https://cactus.nci.nih.gov/>.