Name Mode Size
..
testref 040000
definitions.yml 100644 1 kb
README.md
<!-- vimvars: b:markdown_embedded_syntax={'r':''} --> # biodbExpasy An R package for accessing Expasy ENZYME database, based on R package/framework [biodb](https://github.com/pkrog/biodb/). ## Introduction This package is an extension of [biodb](https://github.com/pkrog/biodb/) that implements a connector to Expasy ENZYME database. ## Installation Install the latest version of this package by running the following commands: ```r if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install('biodbExpasy') ``` ## Examples To instantiate a connector to Expasy ENZYME database., run: ```r mybiodb <- biodb::newInst() conn <- mybiodb$getFactory()$createConn('expasy.enzyme') mybiodb$terminate() ``` ## Documentation To get documentation on the implemented connector, run the following command in R: ```r ?biodbExpasy::ExpasyEnzymeConn ``` ## Citations <https://enzyme.expasy.org> * Bairoch A. The ENZYME database in 2000. Nucleic Acids Res 28:304-305(2000), <https://enzyme.expasy.org/data/enz00.pdf>.