1. a4Base
  2. Graph
Graph of a4Base
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  • d78b7ff (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 09:36:39 -0400;
  • e45169b (origin/RELEASE_3_20, RELEASE_3_20) bump x.y.z version to even y prior to creation of RELEASE_3_20 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2024-10-29 09:36:39 -0400;
  • 7a868d3 bump x.y.z version to odd y following creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 10:24:08 -0400;
  • 7312ef9 (origin/RELEASE_3_19, RELEASE_3_19) bump x.y.z version to even y prior to creation of RELEASE_3_19 branch by J Wokaty <jwokaty@users.noreply.github.com> 2024-04-30 10:24:08 -0400;
  • 84de708 bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:46:28 -0400;
  • 26439bb (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 09:46:28 -0400;
  • 90b4173 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:19:28 -0400;
  • 26d5793 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:19:28 -0400;
  • 06934f7 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:05:49 -0400;
  • be70ae7 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:05:49 -0400;
  • bb5384e bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:07:32 +0000;
  • 9ae69e0 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:07:32 +0000;
  • c0d3b29 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:58:48 +0000;
  • d7296e2 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 15:58:47 +0000;
  • 9a2793c bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:48:16 +0000;
  • b2cd105 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:48:16 +0000;
  • ebbd0f4 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:41:12 -0400;
  • 4add242 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:41:12 -0400;
  • 187b5fa fix specification of link for fct with different name help page by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-10-26 12:54:26 +0100;
  • c4377ac update NEWS by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-10-23 18:38:03 +0200;
  • 8d0296b remove parameter axes to points by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-10-23 18:33:33 +0200;
  • 0f558aa fixes documentatin/exports for R CMD CHECK by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-10-23 16:40:23 +0200;
  • 6aa2a00 use Imports rather than Depends + use roxygen2 for documentation (in progress) + use Authors@R by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-10-19 13:13:51 +0200;
  • 5ddcd10 spectralMap: fix legend win-32 by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-10-14 11:21:07 +0200;
  • fbd00bf spectralMap: fix legend win-32 by Laure Cougnaud <laure.cougnaud@openanalytics.eu> 2020-10-14 10:55:56 +0200;
  • a12798d bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:25:17 +0000;
  • f61ee95 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:25:17 +0000;
  • d8bb208 (origin/RELEASE_3_10, RELEASE_3_10) upgrade version number in DESCRIPTION by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-04-02 10:04:13 +0200;
  • 8221f3b upgrade DESCRIPTION by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-04-02 09:54:07 +0200;
  • 3bbb9e1 fix errors of R CMD check in Windows: add hgu95av2.db + use pdf device in examples (instead of x11) by Laure Cougnaud <laure.cougnaud@openanalytics.eu> 2020-04-01 20:49:38 +0200;
  • 020c85c update maintainer by lcougnaud <laure.cougnaud@openanalytics.eu> 2020-04-01 18:25:19 +0200;
  • bdeb4c7 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:35:28 -0400;
  • 6c81869 bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:20 -0400;
  • 802e14b bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:03 -0400;
  • 8a1e15d (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:25 -0400;
  • 9b4dfb7 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:29 -0400;
  • fc370b2 (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:47 -0400;
  • ff201c0 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:38 -0400;
  • 3918a9e (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:18 -0400;
  • 72d568e bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:11 -0400;
  • 9b8ee4a (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:39:33 -0400;
  • c6be121 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • f674afe (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 0fdf021 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • b697eab bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • 759f20c (origin/RELEASE_3_4, RELEASE_3_4) Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • f5321cd bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • 771cffe bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • 9f8d8e9 (origin/RELEASE_3_3, RELEASE_3_3) Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • 7772608 Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • 7d89060 Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • 8c2fba2 (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • d1f97d7 Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • d283058 Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • fb0ddb2 (origin/RELEASE_3_1, RELEASE_3_1) Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • 169d387 Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • 48e4291 Bumping versions after creating 3.0 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:47:41 +0000;
  • 4b268cd (origin/RELEASE_3_0, RELEASE_3_0) Creating branch for BioC 3.0 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:46:02 +0000;
  • a809573 Bump package versions prior to creating the 3.0 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:38:33 +0000;
  • a1b6577 Second version bump after creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:21:21 +0000;
  • 265246a (origin/RELEASE_2_14, RELEASE_2_14) Creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:17:46 +0000;
  • dd79f9a First version bump prior to creating 2.14 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:07:21 +0000;
  • f7537eb wligtenberg: Fixed references to computeDEStats to point to computeLogRatio by Willem Ligtenberg <willem.ligtenberg@openanalytics.eu> 2014-04-09 08:48:44 +0000;
  • 55bc5c9 modify to new biocViews to DESCRIPTION file by Sonali Arora <sarora@fhcrc.org> 2014-03-04 22:12:21 +0000;
  • ac76805 bump version after release branch has been created by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:47:19 +0000;
  • ee08214 (origin/RELEASE_2_13, RELEASE_2_13) Creating branch for BioC 2.13 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:43:43 +0000;
  • e9c6265 bump versions prior to creating BioC 2.13 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:29:21 +0000;
  • 62c71dc Forgot version bump adding myself as author to the package I touched by Willem Ligtenberg <willem.ligtenberg@openanalytics.eu> 2013-10-02 06:58:29 +0000;
  • 3355641 Switched from an old C call to bincode, to the new R function .bincode by Willem Ligtenberg <willem.ligtenberg@openanalytics.eu> 2013-10-01 14:21:46 +0000;
  • a077878 Bump y in version x.y.z to odd number in devel by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 22:06:11 +0000;
  • d601741 (origin/RELEASE_2_12, RELEASE_2_12) Creating branch for BioC 2.12 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:56:22 +0000;
  • f814271 bump y of x.y.z version number for BioC 2.12 release by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:32:27 +0000;
  • 723961a Fix for the recently introduced bog in volcanoPlot.R by Willem Ligtenberg <willem.ligtenberg@openanalytics.eu> 2013-03-11 10:17:59 +0000;
  • fcb0dd3 improvement to handle situations with one replicate in computeLogRatio by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2013-03-05 16:36:24 +0000;
  • a86ee33 volcanoplotter improvements + tidying by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2013-03-05 16:23:43 +0000;
  • afd0a53 Added myself as a maintainer by Willem Ligtenberg <willem.ligtenberg@openanalytics.eu> 2013-02-06 09:33:41 +0000;
  • 33739aa add "probe2gene" to "limmaRegression" function by Willem Talloen <wtalloen@its.jnj.com> 2012-10-12 14:30:13 +0000;
  • 4f2971d bump package versions after creating 2.11 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:43:56 +0000;
  • b651423 (origin/RELEASE_2_11, RELEASE_2_11) Creating branch for BioC 2.11 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:37:11 +0000;
  • 813ba54 Bump all packages before creating 2.11 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-10-01 22:16:24 +0000;
  • 6defd20 add limmaReg function by Willem Talloen <wtalloen@its.jnj.com> 2012-09-05 15:02:17 +0000;
  • 16f7a6c (origin/RELEASE_2_10, RELEASE_2_10) coerce 'groups' to factor by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-04-05 08:22:31 +0000;
  • a6d6908 plot1gene: coerce 'groups to factor' by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-31 21:54:57 +0000;
  • a592bc5 bumped version numbers after creating 2.10 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:15:56 +0000;
  • 63fdfd1 Creating branch for BioC 2.10 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:10:45 +0000;
  • b30fe0d first version bump prior to creating 2.10 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-30 22:05:02 +0000;
  • 421a54d error when 'groups' variable contains missing values (spectralMap) by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-29 09:04:37 +0000;
  • aa72f00 fix usage sections by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-23 21:44:37 +0000;
  • ce4b54e bumped version by Dan Tenenbaum <dtenenba@fhcrc.org> 2012-03-23 20:38:52 +0000;
  • 089cd14 add documentation on alpha and Janssen arguments by Willem Talloen <wtalloen@its.jnj.com> 2012-03-23 20:35:48 +0000;
  • 6f47bf5 add documentation for dots ", ..." by Willem Talloen <wtalloen@its.jnj.com> 2012-03-23 20:31:16 +0000;
  • bc4a777 made plotCombMultSamples function more flexible (now possible to add labels) by Willem Talloen <wtalloen@its.jnj.com> 2012-03-22 09:30:41 +0000;
  • bd6145e trying to add warning("'groups' should refer to a factor variable \n The variable has been transformed into factor variable") -> STILL AN ERROR by Willem Talloen <wtalloen@its.jnj.com> 2012-03-22 09:29:58 +0000;
  • 4d882d4 extra colors in a4palette by Willem Talloen <wtalloen@its.jnj.com> 2012-03-22 08:49:03 +0000;
  • 841756c 1.2.3 -- circumvent build issues on certain versions of windows by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-05 11:38:11 +0000;
  • 6e0ea18 (origin/RELEASE_2_9, RELEASE_2_9) circumvent build issues on certain versions of windows by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-05 11:35:56 +0000;
  • 8dd3d5f circumvent nlcv error (scoresPlot) by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-03 20:54:46 +0000;
  • 5683582 abbreviate axis names by Tobias Verbeke <tobias.verbeke@openanalytics.eu> 2012-03-03 20:46:01 +0000;
  • 2d39fd7 Add \dontrun{ to avoid the error message during build by Willem Talloen <wtalloen@its.jnj.com> 2012-03-02 15:20:45 +0000;
  • 7c0b4cc Add \dontrun{ to avoid the error message during build by Willem Talloen <wtalloen@its.jnj.com> 2012-03-02 15:20:37 +0000;