Graph ofTrajectoryGeometry
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  • edd6ad4 (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:23:58 -0400;
  • 387a24d (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:23:58 -0400;
  • 3fdf573 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:12:50 +0000;
  • 1ec0987 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:12:50 +0000;
  • f1eb767 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:06:54 +0000;
  • d76c075 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:06:54 +0000;
  • 7021290 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:59:42 +0000;
  • 2e2323e (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:59:42 +0000;
  • fb05c9f fix news formatting by Lori Shepherd <lori.shepherd@roswellpark.org> 2021-05-18 16:09:47 -0400;
  • 46d30dd News added for version 0.99.12 by AnnaLaddach <annaladdach@gmail.com> 2021-01-27 13:40:18 +0000;
  • 238909e version 0.99.12 by AnnaLaddach <annaladdach@gmail.com> 2021-01-27 13:32:55 +0000;
  • 338c33c Removed top level doc/ by Michael Shapiro <sifka@earthlink.net> 2021-01-27 09:51:58 +0000;
  • 8564ef8 depends R (>=4.1) by AnnaLaddach <annaladdach@gmail.com> 2021-01-13 14:41:37 +0000;
  • 11117c6 extra formatting changes by AnnaLaddach <annaladdach@gmail.com> 2021-01-13 14:06:05 +0000;
  • 4fdaf28 Built vignettes. by Michael Shapiro <sifka@earthlink.net> 2021-01-13 13:57:46 +0000;
  • 5614324 NEWS.md added, formatting stuff by AnnaLaddach <annaladdach@gmail.com> 2021-01-13 13:46:05 +0000;
  • 9864b17 Updated data.R to reference the TrajectoryGeometryData repository and updated the man/... files accordingly. by Michael Shapiro <sifka@earthlink.net> 2021-01-12 16:40:02 +0000;
  • e1a07c6 whitespace, line-lengths and single-cell data sources sorted by AnnaLaddach <annaladdach@gmail.com> 2021-01-12 14:29:44 +0000;
  • 2e970a5 Removed documentation for functions which are not exported. by Michael Shapiro <sifka@earthlink.net> 2021-01-01 16:41:44 +0000;
  • 60bbd2b line lengths in /R edited by AnnaLaddach <annaladdach@gmail.com> 2020-12-15 16:12:51 +0000;
  • ba10393 most whitespace sorted out by AnnaLaddach <annaladdach@gmail.com> 2020-12-15 15:29:10 +0000;
  • eab6045 R version dependency changed by AnnaLaddach <annaladdach@gmail.com> 2020-11-26 10:15:30 +0000;
  • 706ea7c traj2Data documented by AnnaLaddach <annaladdach@gmail.com> 2020-11-25 14:56:58 +0000;
  • 116780f version 0.99.7 by AnnaLaddach <annaladdach@gmail.com> 2020-11-04 10:03:46 +0000;
  • b6edc22 version 0.99.6 by AnnaLaddach <annaladdach@gmail.com> 2020-11-03 11:38:36 +0000;
  • eaef2ee version 0.99.5 by AnnaLaddach <annaladdach@gmail.com> 2020-11-02 16:33:16 +0000;
  • 2377f4c .Rhistory files removed by AnnaLaddach <annaladdach@gmail.com> 2020-11-02 16:04:28 +0000;
  • d25d4b9 version 0.99.3 by AnnaLaddach <annaladdach@gmail.com> 2020-11-02 15:47:27 +0000;
  • 34172cc Trying to re-establish the vignette. by Michael Shapiro <sifka@earthlink.net> 2020-11-02 15:44:46 +0000;
  • a70b9d8 Vignette edit by AnnaLaddach <annaladdach@gmail.com> 2020-11-02 14:20:34 +0000;
  • 9ba167f Version 0.99.1 by AnnaLaddach <annaladdach@gmail.com> 2020-10-29 21:03:00 +0000;
  • c950d92 Built the vignettes. by Michael Shapiro <sifka@earthlink.net> 2020-10-29 16:25:03 +0000;
  • 3420f16 N decreased for examples by AnnaLaddach <annaladdach@gmail.com> 2020-10-29 13:20:12 +0000;
  • 9b91eab Built the vignettes. by Michael Shapiro <sifka@earthlink.net> 2020-10-25 11:25:16 +0000;
  • 1f338c9 more vignette changes by AnnaLaddach <annaladdach@gmail.com> 2020-10-24 23:06:18 +0100;
  • 49eaca5 vignette modifications by AnnaLaddach <annaladdach@gmail.com> 2020-10-24 22:03:11 +0100;
  • a2649cb Restored doc. by Michael Shapiro <sifka@earthlink.net> 2020-10-24 11:23:24 +0100;
  • ef71bfb Fiddled with vignettes. by Michael Shapiro <sifka@earthlink.net> 2020-10-23 14:28:08 +0100;
  • 094b1de Various including title fix for vignette. by Michael Shapiro <sifka@earthlink.net> 2020-10-23 10:08:44 +0100;
  • 064b4eb Set version to 0.99.0 by Michael Shapiro <sifka@earthlink.net> 2020-10-22 19:30:45 +0100;
  • c189bca Various BiocCheck picky stuff. by Michael Shapiro <sifka@earthlink.net> 2020-10-22 18:50:05 +0100;
  • a08acff Added a citation. by Michael Shapiro <sifka@earthlink.net> 2020-10-21 14:43:32 +0100;
  • 905b91b Modified DESCRIPTION, added returns and documentation to parameter testing. by Michael Shapiro <sifka@earthlink.net> 2020-10-16 20:07:16 +0100;
  • c76038e Added things to .gitignore by Michael Shapiro <sifka@earthlink.net> 2020-10-16 19:03:47 +0100;
  • 715f737 Branch point functions added, version 0.0.0.9002 by AnnaLaddach <annaladdach@gmail.com> 2020-10-12 21:41:14 +0100;
  • d009dfe Pushed version number by Michael Shapiro <sifka@earthlink.net> 2020-09-04 16:36:37 +0100;
  • d1aaafb vignette changed, tests and examples added by AnnaLaddach <annaladdach@gmail.com> 2020-09-03 21:45:03 +0100;
  • 4eaa641 Added figures to single cell vignette. by Michael Shapiro <sifka@earthlink.net> 2020-08-18 11:13:53 +0100;
  • 4667ad3 bugs fixed by AnnaLaddach <annaladdach@gmail.com> 2020-08-10 17:00:35 +0100;
  • da16c1d Small fix. by Michael Shapiro <sifka@earthlink.net> 2020-08-10 10:19:23 +0100;
  • 89bd56f Added parameter testing for a plotting function. by Michael Shapiro <sifka@earthlink.net> 2020-08-10 10:09:07 +0100;
  • 7d43214 Added code to test the inputs to functions. by Michael Shapiro <sifka@earthlink.net> 2020-08-07 16:57:14 +0100;
  • bbb1784 Removed trace code. by Michael Shapiro <sifka@earthlink.net> 2020-08-06 15:04:51 +0100;
  • 58cb6f9 I think there are no changes here. by Michael Shapiro <sifka@earthlink.net> 2020-08-06 14:40:41 +0100;
  • f4cdcd8 Merge branch 'master' of https://github.com/AnnaLaddach/TrajectoryGeometry by Michael Shapiro <sifka@earthlink.net> 2020-08-06 13:59:10 +0100;
  • f7ec560 Modified DESCRIPTION to fix a check() error, fixed some warnings and notes. by Michael Shapiro <sifka@earthlink.net> 2020-08-06 13:55:02 +0100;
  • 5bb44a0 changes to vignette and documentation by AnnaLaddach <annaladdach@gmail.com> 2020-08-06 12:39:29 +0100;
  • 002b9f1 Single cell trajectory analysis fuctions added by AnnaLaddach <annaladdach@gmail.com> 2020-07-30 13:21:33 +0100;
  • 9c191c8 Reconciled divergence. Changed returned value from testPathForDirectionality by Michael Shapiro <sifka@earthlink.net> 2020-07-14 12:41:49 +0100;
  • 34f4596 started on single cell vignette by AnnaLaddach <annaladdach@gmail.com> 2020-07-13 16:32:36 +0100;
  • 8091b92 first draft samplePath function by AnnaLaddach <annaladdach@gmail.com> 2020-06-30 12:10:06 +0100;
  • d7237d6 Wrote a function to measure the progression of a path in a direction and jazzed up the vignette to reflect this. by Michael Shapiro <sifka@earthlink.net> 2020-06-09 16:54:24 +0100;
  • ea9c37b Have expanded the vignette. by Michael Shapiro <sifka@earthlink.net> 2020-06-04 19:52:34 +0100;
  • 5a4f6f2 This modifies the path randomization so that paths can be randomized either by permutation of the matrix or by taking steps. by Michael Shapiro <sifka@earthlink.net> 2020-06-03 17:40:36 +0100;
  • d1cdbaf Documented the data in R/data.R by Michael Shapiro <sifka@earthlink.net> 2020-05-26 15:25:19 +0100;
  • 5b468ef Added examples for the functions. by Michael Shapiro <sifka@earthlink.net> 2020-05-25 16:15:55 +0100;
  • 92c52a3 This adds improved data by making the circles, their centers using the package. by Michael Shapiro <sifka@earthlink.net> 2020-05-25 15:18:46 +0100;
  • e6ae102 The changes to the documentaion are the result of a misconception as to the source of some problems. HOWEVER I was able to track down and fix some bugs and successfully run testPathForDirectionality using straightPath as my test data. by Michael Shapiro <sifka@earthlink.net> 2020-05-21 17:56:41 +0100;
  • 77827ed history removed by AnnaLaddach <annaladdach@gmail.com> 2020-04-19 13:26:47 +0100;
  • 2404ba6 code for finding center added by AnnaLaddach <annaladdach@gmail.com> 2020-04-19 13:22:08 +0100;
  • ba14390 Function to plot path, projection, center, circle now works. Maybe some of the plotting parameters should be tweaked. by Michael Shapiro <sifka@earthlink.net> 2020-04-15 10:42:22 +0100;
  • 7622c9d This sketches out the plotting function for paths, projections etc. by Michael Shapiro <sifka@earthlink.net> 2020-04-14 19:58:05 +0100;
  • 48aa332 This seems to have solved the problem with the data for the plotting function. Unfortunately, I lost the copy with the plotting function! by Michael Shapiro <sifka@earthlink.net> 2020-04-14 17:48:56 +0100;
  • 1dea53b I've started working on some code to plot 3D figures of paths and their projections onto the sphere. To that end, I've made some synthetic data to run in examples, but the data needs debugging. by Michael Shapiro <sifka@earthlink.net> 2020-04-13 19:46:06 +0100;
  • b344083 This fixes a weird thingy with @importFrom and NAMESPACE. by Michael Shapiro <sifka@earthlink.net> 2020-04-10 12:48:01 +0100;
  • ece1f4e This now contains code and documentation. by Michael Shapiro <sifka@earthlink.net> 2020-04-10 12:42:19 +0100;
  • a9506c1 First commit by AnnaLaddach <annaladdach@gmail.com> 2020-04-10 12:20:45 +0100;
  • f0d740e Initial commit by AnnaLaddach <annaladdach@gmail.com> 2020-04-10 12:16:11 +0100;