Name Mode Size
..
BreakpointGRanges.R 100644 41 kb
StructuralVariantAnnotation.R 100644 1 kb
eventDetection.R 100644 14 kb
extensions-VCF.R 100644 30 kb
plotting.R 100644 1 kb
unittesthelper.R 100644 8 kb
util.R 100644 3 kb
vcfConstants.R 100644 0 kb
README.md
# StructuralVariantAnnotation StructuralVariantAnnotation contains useful helper functions for dealing with structural variants in VCF format. The packages contains functions for parsing VCFs from a number of popular callers as well as functions for dealing with breakpoints involving two separate genomic loci encoded as GRanges objects. ## Installation The StructuralVariantAnnotation package can be installed using BioConductor: ``` if (!requireNamespace("BiocManager", quietly=TRUE)) { install.packages("BiocManager") } BiocManager::install("StructuralVariantAnnotation") ```